Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
PCF11O94913 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCF11O94913 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCF11O94913 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCF11O94913 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
PCF11O94913 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC27.18■■□□□ 1.94
PCF11O94913 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCF11O94913 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCF11O94913 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PCF11O94913 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCF11O94913 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCF11O94913 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PCF11O94913 AC007274.1-201ENST00000439805 662 ntBASIC27.18■■□□□ 1.94
PCF11O94913 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCF11O94913 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC27.18■■□□□ 1.94
PCF11O94913 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
PCF11O94913 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCF11O94913 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC27.17■■□□□ 1.94
PCF11O94913 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PCF11O94913 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC27.17■■□□□ 1.94
PCF11O94913 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
PCF11O94913 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCF11O94913 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCF11O94913 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCF11O94913 CD82-202ENST00000342935 967 ntTSL 5 BASIC27.17■■□□□ 1.94
PCF11O94913 FAM58CP-201ENST00000435741 640 ntBASIC27.17■■□□□ 1.94
PCF11O94913 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC27.17■■□□□ 1.94
PCF11O94913 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC27.17■■□□□ 1.94
PCF11O94913 LYSMD4-203ENST00000378904 2122 ntBASIC27.17■■□□□ 1.94
PCF11O94913 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC27.16■■□□□ 1.94
PCF11O94913 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PCF11O94913 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCF11O94913 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCF11O94913 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PCF11O94913 STOM-202ENST00000347359 870 ntTSL 2 BASIC27.16■■□□□ 1.94
PCF11O94913 DDT-204ENST00000404092 805 ntTSL 3 BASIC27.16■■□□□ 1.94
PCF11O94913 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC27.16■■□□□ 1.94
PCF11O94913 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC27.16■■□□□ 1.94
PCF11O94913 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC27.16■■□□□ 1.94
PCF11O94913 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC27.16■■□□□ 1.94
PCF11O94913 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC27.16■■□□□ 1.94
PCF11O94913 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PCF11O94913 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PCF11O94913 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCF11O94913 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCF11O94913 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
PCF11O94913 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCF11O94913 CXCL1P1-201ENST00000502804 216 ntBASIC27.15■■□□□ 1.94
PCF11O94913 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
PCF11O94913 SNHG9-202ENST00000564014 471 ntBASIC27.15■■□□□ 1.94
PCF11O94913 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC27.15■■□□□ 1.94
PCF11O94913 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC27.15■■□□□ 1.94
PCF11O94913 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
PCF11O94913 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCF11O94913 GOLGA6L17P-202ENST00000614358 1398 ntBASIC27.15■■□□□ 1.94
PCF11O94913 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCF11O94913 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PCF11O94913 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC27.15■■□□□ 1.94
PCF11O94913 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCF11O94913 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCF11O94913 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCF11O94913 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC27.15■■□□□ 1.94
PCF11O94913 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCF11O94913 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.94
PCF11O94913 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC27.14■■□□□ 1.94
PCF11O94913 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC27.14■■□□□ 1.94
PCF11O94913 AP002472.1-201ENST00000577490 586 ntBASIC27.14■■□□□ 1.94
PCF11O94913 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC27.14■■□□□ 1.94
PCF11O94913 AC092902.6-201ENST00000641783 218 ntBASIC27.14■■□□□ 1.94
PCF11O94913 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCF11O94913 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCF11O94913 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC27.14■■□□□ 1.94
PCF11O94913 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC27.14■■□□□ 1.94
PCF11O94913 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC27.14■■□□□ 1.93
PCF11O94913 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC27.14■■□□□ 1.93
PCF11O94913 HNRNPRP1-201ENST00000453465 1695 ntBASIC27.14■■□□□ 1.93
PCF11O94913 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
PCF11O94913 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
PCF11O94913 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
PCF11O94913 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
PCF11O94913 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC27.14■■□□□ 1.93
PCF11O94913 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
PCF11O94913 AP000344.2-201ENST00000512987 629 ntBASIC27.14■■□□□ 1.93
PCF11O94913 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC27.14■■□□□ 1.93
PCF11O94913 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC27.14■■□□□ 1.93
PCF11O94913 RBM7-207ENST00000544582 692 ntTSL 3 BASIC27.14■■□□□ 1.93
PCF11O94913 LINC01451-201ENST00000623792 534 ntBASIC27.14■■□□□ 1.93
PCF11O94913 AL035252.4-201ENST00000624174 288 ntBASIC27.14■■□□□ 1.93
PCF11O94913 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
PCF11O94913 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PCF11O94913 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC27.13■■□□□ 1.93
PCF11O94913 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
PCF11O94913 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCF11O94913 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCF11O94913 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC27.13■■□□□ 1.93
PCF11O94913 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCF11O94913 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC27.13■■□□□ 1.93
PCF11O94913 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCF11O94913 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC27.13■■□□□ 1.93
PCF11O94913 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC27.13■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms