Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.46■□□□□ 0.87
CDKL5O76039 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKL5O76039 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKL5O76039 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CDKL5O76039 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKL5O76039 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CDKL5O76039 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDKL5O76039 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.46■□□□□ 0.87
CDKL5O76039 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.46■□□□□ 0.87
CDKL5O76039 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.46■□□□□ 0.87
CDKL5O76039 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDKL5O76039 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
CDKL5O76039 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.46■□□□□ 0.87
CDKL5O76039 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
CDKL5O76039 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.45■□□□□ 0.87
CDKL5O76039 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDKL5O76039 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDKL5O76039 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDKL5O76039 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.45■□□□□ 0.86
CDKL5O76039 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDKL5O76039 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.45■□□□□ 0.86
CDKL5O76039 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.45■□□□□ 0.86
CDKL5O76039 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.45■□□□□ 0.86
CDKL5O76039 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.45■□□□□ 0.86
CDKL5O76039 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC20.45■□□□□ 0.86
CDKL5O76039 AC109462.3-201ENST00000573934 613 ntBASIC20.45■□□□□ 0.86
CDKL5O76039 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
CDKL5O76039 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC20.45■□□□□ 0.86
CDKL5O76039 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDKL5O76039 AC011467.2-201ENST00000598425 242 ntBASIC20.45■□□□□ 0.86
CDKL5O76039 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.45■□□□□ 0.86
CDKL5O76039 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDKL5O76039 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.45■□□□□ 0.86
CDKL5O76039 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDKL5O76039 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.45■□□□□ 0.86
CDKL5O76039 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CDKL5O76039 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDKL5O76039 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDKL5O76039 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDKL5O76039 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.44■□□□□ 0.86
CDKL5O76039 AC016396.2-201ENST00000562575 1417 ntBASIC20.44■□□□□ 0.86
CDKL5O76039 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CDKL5O76039 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDKL5O76039 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CDKL5O76039 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDKL5O76039 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.44■□□□□ 0.86
CDKL5O76039 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDKL5O76039 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDKL5O76039 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CDKL5O76039 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.44■□□□□ 0.86
CDKL5O76039 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.44■□□□□ 0.86
CDKL5O76039 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDKL5O76039 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CDKL5O76039 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
CDKL5O76039 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.44■□□□□ 0.86
CDKL5O76039 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDKL5O76039 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.44■□□□□ 0.86
CDKL5O76039 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.44■□□□□ 0.86
CDKL5O76039 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.44■□□□□ 0.86
CDKL5O76039 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
CDKL5O76039 NPAP1P7-201ENST00000613027 823 ntBASIC20.44■□□□□ 0.86
CDKL5O76039 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CDKL5O76039 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDKL5O76039 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDKL5O76039 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDKL5O76039 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
CDKL5O76039 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
CDKL5O76039 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CDKL5O76039 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDKL5O76039 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CDKL5O76039 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CDKL5O76039 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL5O76039 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL5O76039 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL5O76039 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL5O76039 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CDKL5O76039 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CDKL5O76039 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CDKL5O76039 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL5O76039 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
CDKL5O76039 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL5O76039 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.43■□□□□ 0.86
CDKL5O76039 ATP5G2P1-201ENST00000433580 426 ntBASIC20.43■□□□□ 0.86
CDKL5O76039 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CDKL5O76039 MIR3180-1-201ENST00000580374 94 ntBASIC20.43■□□□□ 0.86
CDKL5O76039 MIR3180-3-201ENST00000584616 94 ntBASIC20.43■□□□□ 0.86
CDKL5O76039 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.43■□□□□ 0.86
CDKL5O76039 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL5O76039 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL5O76039 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.43■□□□□ 0.86
CDKL5O76039 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL5O76039 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL5O76039 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CDKL5O76039 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL5O76039 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL5O76039 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDKL5O76039 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.43■□□□□ 0.86
CDKL5O76039 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CDKL5O76039 NSUN5P1-202ENST00000421140 1535 ntBASIC20.43■□□□□ 0.86
CDKL5O76039 NSUN5P2-203ENST00000457352 1529 ntBASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms