Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UPK1BO75841 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.33■□□□□ 0.04
UPK1BO75841 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
UPK1BO75841 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UPK1BO75841 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.33■□□□□ 0.04
UPK1BO75841 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.33■□□□□ 0.04
UPK1BO75841 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UPK1BO75841 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
UPK1BO75841 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UPK1BO75841 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.33■□□□□ 0.04
UPK1BO75841 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
UPK1BO75841 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.33■□□□□ 0.04
UPK1BO75841 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UPK1BO75841 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UPK1BO75841 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UPK1BO75841 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UPK1BO75841 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UPK1BO75841 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.33■□□□□ 0.04
UPK1BO75841 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UPK1BO75841 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
UPK1BO75841 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.33■□□□□ 0.04
UPK1BO75841 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.33■□□□□ 0.04
UPK1BO75841 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
UPK1BO75841 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
UPK1BO75841 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.32■□□□□ 0.04
UPK1BO75841 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC15.32■□□□□ 0.04
UPK1BO75841 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.32■□□□□ 0.04
UPK1BO75841 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
UPK1BO75841 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
UPK1BO75841 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.32■□□□□ 0.04
UPK1BO75841 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
UPK1BO75841 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.32■□□□□ 0.04
UPK1BO75841 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.32■□□□□ 0.04
UPK1BO75841 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.32■□□□□ 0.04
UPK1BO75841 AL121829.2-201ENST00000620908 328 ntBASIC15.32■□□□□ 0.04
UPK1BO75841 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC15.32■□□□□ 0.04
UPK1BO75841 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
UPK1BO75841 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
UPK1BO75841 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.32■□□□□ 0.04
UPK1BO75841 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.32■□□□□ 0.04
UPK1BO75841 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UPK1BO75841 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.32■□□□□ 0.04
UPK1BO75841 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.32■□□□□ 0.04
UPK1BO75841 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.31■□□□□ 0.04
UPK1BO75841 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.31■□□□□ 0.04
UPK1BO75841 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
UPK1BO75841 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
UPK1BO75841 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.31■□□□□ 0.04
UPK1BO75841 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
UPK1BO75841 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.31■□□□□ 0.04
UPK1BO75841 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
UPK1BO75841 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.31■□□□□ 0.04
UPK1BO75841 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.31■□□□□ 0.04
UPK1BO75841 C1QL1P1-201ENST00000568105 661 ntBASIC15.31■□□□□ 0.04
UPK1BO75841 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.31■□□□□ 0.04
UPK1BO75841 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.31■□□□□ 0.04
UPK1BO75841 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC15.31■□□□□ 0.04
UPK1BO75841 AC022898.2-201ENST00000616822 1312 ntBASIC15.31■□□□□ 0.04
UPK1BO75841 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.31■□□□□ 0.04
UPK1BO75841 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UPK1BO75841 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.31■□□□□ 0.04
UPK1BO75841 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms