Protein–RNA interactions for Protein: O75364

PITX3, Pituitary homeobox 3, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PITX3O75364 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.34□□□□□ -0.11
PITX3O75364 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.34□□□□□ -0.11
PITX3O75364 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.34□□□□□ -0.11
PITX3O75364 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.34□□□□□ -0.11
PITX3O75364 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.34□□□□□ -0.11
PITX3O75364 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PITX3O75364 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.34□□□□□ -0.11
PITX3O75364 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PITX3O75364 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.34□□□□□ -0.11
PITX3O75364 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PITX3O75364 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PITX3O75364 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PITX3O75364 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PITX3O75364 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PITX3O75364 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PITX3O75364 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PITX3O75364 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PITX3O75364 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PITX3O75364 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PITX3O75364 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PITX3O75364 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PITX3O75364 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.11
PITX3O75364 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PITX3O75364 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
PITX3O75364 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PITX3O75364 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PITX3O75364 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PITX3O75364 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PITX3O75364 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PITX3O75364 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.33□□□□□ -0.12
PITX3O75364 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
PITX3O75364 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PITX3O75364 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PITX3O75364 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PITX3O75364 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
PITX3O75364 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
PITX3O75364 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PITX3O75364 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.33□□□□□ -0.12
PITX3O75364 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PITX3O75364 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PITX3O75364 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PITX3O75364 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PITX3O75364 AC005104.2-201ENST00000427818 678 ntBASIC14.33□□□□□ -0.12
PITX3O75364 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PITX3O75364 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.33□□□□□ -0.12
PITX3O75364 AL355355.2-201ENST00000442321 338 ntBASIC14.33□□□□□ -0.12
PITX3O75364 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.33□□□□□ -0.12
PITX3O75364 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.33□□□□□ -0.12
PITX3O75364 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.33□□□□□ -0.12
PITX3O75364 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.33□□□□□ -0.12
PITX3O75364 AL359736.2-201ENST00000621992 437 ntBASIC14.33□□□□□ -0.12
PITX3O75364 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.33□□□□□ -0.12
PITX3O75364 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PITX3O75364 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PITX3O75364 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PITX3O75364 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PITX3O75364 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.33□□□□□ -0.12
PITX3O75364 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PITX3O75364 KRT8P47-201ENST00000604727 1398 ntBASIC14.33□□□□□ -0.12
PITX3O75364 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PITX3O75364 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PITX3O75364 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.33□□□□□ -0.12
PITX3O75364 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PITX3O75364 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PITX3O75364 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PITX3O75364 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PITX3O75364 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PITX3O75364 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PITX3O75364 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PITX3O75364 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PITX3O75364 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PITX3O75364 PCDHA1-201ENST00000378133 2726 ntBASIC14.32□□□□□ -0.12
PITX3O75364 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
PITX3O75364 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PITX3O75364 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PITX3O75364 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.32□□□□□ -0.12
PITX3O75364 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PITX3O75364 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PITX3O75364 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.32□□□□□ -0.12
PITX3O75364 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
PITX3O75364 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.32□□□□□ -0.12
PITX3O75364 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PITX3O75364 AC113404.2-201ENST00000507884 177 ntBASIC14.32□□□□□ -0.12
PITX3O75364 BX088651.1-201ENST00000540551 451 ntBASIC14.32□□□□□ -0.12
PITX3O75364 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.32□□□□□ -0.12
PITX3O75364 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC14.32□□□□□ -0.12
PITX3O75364 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PITX3O75364 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PITX3O75364 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
PITX3O75364 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.32□□□□□ -0.12
PITX3O75364 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PITX3O75364 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.32□□□□□ -0.12
PITX3O75364 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PITX3O75364 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PITX3O75364 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
PITX3O75364 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PITX3O75364 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PITX3O75364 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PITX3O75364 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
PITX3O75364 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms