Protein–RNA interactions for Protein: O60826

CCDC22, Coiled-coil domain-containing protein 22, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC22O60826 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC22O60826 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC22O60826 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC22O60826 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCDC22O60826 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC22O60826 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC22O60826 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC22O60826 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC22O60826 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC22O60826 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC22O60826 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC22O60826 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC22O60826 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC22O60826 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC22O60826 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC22O60826 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC22O60826 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC22O60826 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC22O60826 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC22O60826 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC22O60826 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC22O60826 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
CCDC22O60826 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.24■□□□□ 0.35
CCDC22O60826 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC22O60826 SLC25A1P4-201ENST00000567977 778 ntBASIC17.24■□□□□ 0.35
CCDC22O60826 AC142086.2-201ENST00000569753 217 ntBASIC17.24■□□□□ 0.35
CCDC22O60826 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.24■□□□□ 0.35
CCDC22O60826 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC22O60826 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCDC22O60826 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC22O60826 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC22O60826 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC22O60826 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC22O60826 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC22O60826 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC22O60826 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC22O60826 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC22O60826 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC22O60826 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCDC22O60826 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CCDC22O60826 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC22O60826 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC22O60826 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC22O60826 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC22O60826 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC22O60826 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC22O60826 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC22O60826 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC22O60826 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC22O60826 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC22O60826 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC22O60826 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC22O60826 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC22O60826 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CCDC22O60826 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC22O60826 RN7SL471P-201ENST00000580476 299 ntBASIC17.23■□□□□ 0.35
CCDC22O60826 AF186192.3-201ENST00000583427 947 ntBASIC17.23■□□□□ 0.35
CCDC22O60826 DGCR10-201ENST00000609839 495 ntBASIC17.23■□□□□ 0.35
CCDC22O60826 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC22O60826 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC22O60826 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC22O60826 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC22O60826 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CCDC22O60826 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC22O60826 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC22O60826 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC22O60826 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC22O60826 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC22O60826 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC22O60826 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC22O60826 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC22O60826 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC22O60826 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC22O60826 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC22O60826 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC22O60826 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC22O60826 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC22O60826 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC22O60826 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC22O60826 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC22O60826 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC22O60826 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC22O60826 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC22O60826 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC22O60826 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC22O60826 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC22O60826 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC22O60826 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC22O60826 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CCDC22O60826 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.22■□□□□ 0.35
CCDC22O60826 WWOX-216ENST00000569818 525 ntBASIC17.22■□□□□ 0.35
CCDC22O60826 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CCDC22O60826 AC112497.1-201ENST00000624824 639 ntBASIC17.22■□□□□ 0.35
CCDC22O60826 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC22O60826 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC22O60826 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC22O60826 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC22O60826 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC22O60826 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CCDC22O60826 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms