Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 AC124864.1-201ENST00000623408 392 ntBASIC16.82■□□□□ 0.28
PCDH7O60245 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH7O60245 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDH7O60245 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDH7O60245 PRORSD1P-202ENST00000563365 2154 ntBASIC16.82■□□□□ 0.28
PCDH7O60245 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH7O60245 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH7O60245 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDH7O60245 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH7O60245 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH7O60245 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH7O60245 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDH7O60245 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PCDH7O60245 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PCDH7O60245 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH7O60245 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH7O60245 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH7O60245 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDH7O60245 AC009053.2-201ENST00000563701 2365 ntBASIC16.81■□□□□ 0.28
PCDH7O60245 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH7O60245 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH7O60245 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDH7O60245 AC097374.2-201ENST00000618617 1306 ntBASIC16.81■□□□□ 0.28
PCDH7O60245 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDH7O60245 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH7O60245 AL031133.1-201ENST00000406807 723 ntBASIC16.81■□□□□ 0.28
PCDH7O60245 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDH7O60245 RN7SL606P-201ENST00000472779 293 ntBASIC16.81■□□□□ 0.28
PCDH7O60245 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDH7O60245 AC090616.6-201ENST00000582640 721 ntBASIC16.81■□□□□ 0.28
PCDH7O60245 IGHV3-41-201ENST00000613121 348 ntBASIC16.81■□□□□ 0.28
PCDH7O60245 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDH7O60245 AL121956.5-201ENST00000625261 221 ntBASIC16.81■□□□□ 0.28
PCDH7O60245 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDH7O60245 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH7O60245 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH7O60245 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH7O60245 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDH7O60245 LYSMD4-203ENST00000378904 2122 ntBASIC16.81■□□□□ 0.28
PCDH7O60245 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH7O60245 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDH7O60245 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCDH7O60245 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH7O60245 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH7O60245 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH7O60245 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH7O60245 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH7O60245 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH7O60245 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH7O60245 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCDH7O60245 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH7O60245 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH7O60245 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH7O60245 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH7O60245 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH7O60245 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH7O60245 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.8■□□□□ 0.28
PCDH7O60245 KRT8P26-201ENST00000534154 1276 ntBASIC16.8■□□□□ 0.28
PCDH7O60245 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH7O60245 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDH7O60245 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH7O60245 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH7O60245 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDH7O60245 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PCDH7O60245 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDH7O60245 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDH7O60245 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH7O60245 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCDH7O60245 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH7O60245 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH7O60245 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
PCDH7O60245 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH7O60245 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDH7O60245 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH7O60245 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH7O60245 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH7O60245 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH7O60245 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH7O60245 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH7O60245 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH7O60245 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PCDH7O60245 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH7O60245 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH7O60245 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH7O60245 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PCDH7O60245 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH7O60245 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH7O60245 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH7O60245 COX5BP2-201ENST00000392354 334 ntBASIC16.79■□□□□ 0.28
PCDH7O60245 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH7O60245 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH7O60245 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH7O60245 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH7O60245 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDH7O60245 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH7O60245 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH7O60245 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH7O60245 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
PCDH7O60245 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
PCDH7O60245 NTF6B-201ENST00000591913 560 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms