Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PHF1O43189 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PHF1O43189 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PHF1O43189 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC15.24■□□□□ 0.03
PHF1O43189 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.24■□□□□ 0.03
PHF1O43189 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHF1O43189 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHF1O43189 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHF1O43189 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PHF1O43189 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.24■□□□□ 0.03
PHF1O43189 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PHF1O43189 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PHF1O43189 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PHF1O43189 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PHF1O43189 KRT18P41-201ENST00000518924 1277 ntBASIC15.24■□□□□ 0.03
PHF1O43189 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHF1O43189 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.24■□□□□ 0.03
PHF1O43189 RNF126P1-202ENST00000569893 925 ntBASIC15.24■□□□□ 0.03
PHF1O43189 AL121912.1-201ENST00000603683 238 ntBASIC15.24■□□□□ 0.03
PHF1O43189 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PHF1O43189 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.24■□□□□ 0.03
PHF1O43189 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.24■□□□□ 0.03
PHF1O43189 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHF1O43189 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PHF1O43189 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PHF1O43189 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHF1O43189 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PHF1O43189 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHF1O43189 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
PHF1O43189 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PHF1O43189 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHF1O43189 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PHF1O43189 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PHF1O43189 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PHF1O43189 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PHF1O43189 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHF1O43189 HLA-A-201ENST00000376802 1334 ntBASIC15.23■□□□□ 0.03
PHF1O43189 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC15.23■□□□□ 0.03
PHF1O43189 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHF1O43189 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PHF1O43189 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.23■□□□□ 0.03
PHF1O43189 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PHF1O43189 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHF1O43189 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PHF1O43189 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PHF1O43189 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHF1O43189 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHF1O43189 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PHF1O43189 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHF1O43189 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHF1O43189 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
PHF1O43189 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
PHF1O43189 AC092865.5-201ENST00000545435 363 ntBASIC15.23■□□□□ 0.03
PHF1O43189 MPI-205ENST00000562606 1052 ntTSL 3 BASIC15.23■□□□□ 0.03
PHF1O43189 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.23■□□□□ 0.03
PHF1O43189 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.23■□□□□ 0.03
PHF1O43189 AF228730.7-201ENST00000641842 219 ntBASIC15.23■□□□□ 0.03
PHF1O43189 AC106820.2-201ENST00000563775 3264 ntBASIC15.23■□□□□ 0.03
PHF1O43189 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHF1O43189 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PHF1O43189 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PHF1O43189 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHF1O43189 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PHF1O43189 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.23■□□□□ 0.03
PHF1O43189 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.23■□□□□ 0.03
PHF1O43189 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PHF1O43189 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.22■□□□□ 0.03
PHF1O43189 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.22■□□□□ 0.03
PHF1O43189 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHF1O43189 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHF1O43189 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.22■□□□□ 0.03
PHF1O43189 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.22■□□□□ 0.03
PHF1O43189 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.22■□□□□ 0.03
PHF1O43189 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.22■□□□□ 0.03
PHF1O43189 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHF1O43189 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHF1O43189 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHF1O43189 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHF1O43189 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
PHF1O43189 FAM220CP-201ENST00000395253 831 ntBASIC15.22■□□□□ 0.03
PHF1O43189 TSPY22P-201ENST00000427496 604 ntBASIC15.22■□□□□ 0.03
PHF1O43189 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.22■□□□□ 0.03
PHF1O43189 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.22■□□□□ 0.03
PHF1O43189 AP003733.1-201ENST00000491725 852 ntBASIC15.22■□□□□ 0.03
PHF1O43189 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.22■□□□□ 0.03
PHF1O43189 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.22■□□□□ 0.03
PHF1O43189 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.22■□□□□ 0.03
PHF1O43189 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.22■□□□□ 0.03
PHF1O43189 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.22■□□□□ 0.03
PHF1O43189 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.22■□□□□ 0.03
PHF1O43189 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHF1O43189 AC009053.2-201ENST00000563701 2365 ntBASIC15.22■□□□□ 0.03
PHF1O43189 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHF1O43189 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PHF1O43189 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHF1O43189 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
PHF1O43189 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PHF1O43189 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHF1O43189 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PHF1O43189 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms