Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.1■□□□□ 0.97
SEMA3EO15041 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SEMA3EO15041 LINC00304-203ENST00000565008 1864 ntBASIC21.09■□□□□ 0.97
SEMA3EO15041 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEMA3EO15041 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEMA3EO15041 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SEMA3EO15041 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEMA3EO15041 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEMA3EO15041 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.09■□□□□ 0.97
SEMA3EO15041 PTCHD3P3-201ENST00000403073 906 ntBASIC21.09■□□□□ 0.97
SEMA3EO15041 HNRNPA1P28-201ENST00000424481 961 ntBASIC21.09■□□□□ 0.97
SEMA3EO15041 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC21.09■□□□□ 0.97
SEMA3EO15041 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC21.09■□□□□ 0.97
SEMA3EO15041 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.09■□□□□ 0.97
SEMA3EO15041 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC21.09■□□□□ 0.97
SEMA3EO15041 RIN3-211ENST00000557762 517 ntTSL 3 BASIC21.09■□□□□ 0.97
SEMA3EO15041 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC21.09■□□□□ 0.97
SEMA3EO15041 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC21.09■□□□□ 0.97
SEMA3EO15041 GGTLC5P-201ENST00000617623 998 ntBASIC21.09■□□□□ 0.97
SEMA3EO15041 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SEMA3EO15041 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.09■□□□□ 0.97
SEMA3EO15041 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.09■□□□□ 0.97
SEMA3EO15041 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.09■□□□□ 0.97
SEMA3EO15041 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEMA3EO15041 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEMA3EO15041 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC21.09■□□□□ 0.97
SEMA3EO15041 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SEMA3EO15041 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
SEMA3EO15041 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SEMA3EO15041 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.09■□□□□ 0.97
SEMA3EO15041 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.97
SEMA3EO15041 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
SEMA3EO15041 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SEMA3EO15041 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA3EO15041 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.08■□□□□ 0.97
SEMA3EO15041 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA3EO15041 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA3EO15041 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA3EO15041 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.08■□□□□ 0.97
SEMA3EO15041 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA3EO15041 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
SEMA3EO15041 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
SEMA3EO15041 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA3EO15041 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.08■□□□□ 0.97
SEMA3EO15041 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA3EO15041 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA3EO15041 VN2R19P-201ENST00000442399 1052 ntBASIC21.08■□□□□ 0.97
SEMA3EO15041 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC21.08■□□□□ 0.97
SEMA3EO15041 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
SEMA3EO15041 AC139530.3-201ENST00000620344 690 ntBASIC21.08■□□□□ 0.97
SEMA3EO15041 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.08■□□□□ 0.97
SEMA3EO15041 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SEMA3EO15041 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.08■□□□□ 0.96
SEMA3EO15041 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
SEMA3EO15041 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SEMA3EO15041 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.08■□□□□ 0.96
SEMA3EO15041 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SEMA3EO15041 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SEMA3EO15041 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SEMA3EO15041 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SEMA3EO15041 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
SEMA3EO15041 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SEMA3EO15041 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
SEMA3EO15041 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC21.07■□□□□ 0.96
SEMA3EO15041 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SEMA3EO15041 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.07■□□□□ 0.96
SEMA3EO15041 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA3EO15041 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.07■□□□□ 0.96
SEMA3EO15041 CRYGEP-201ENST00000412192 528 ntBASIC21.07■□□□□ 0.96
SEMA3EO15041 AC004832.2-201ENST00000426397 482 ntBASIC21.07■□□□□ 0.96
SEMA3EO15041 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA3EO15041 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.07■□□□□ 0.96
SEMA3EO15041 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.07■□□□□ 0.96
SEMA3EO15041 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC21.07■□□□□ 0.96
SEMA3EO15041 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.07■□□□□ 0.96
SEMA3EO15041 AL135999.2-201ENST00000622438 1686 ntBASIC21.07■□□□□ 0.96
SEMA3EO15041 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA3EO15041 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.07■□□□□ 0.96
SEMA3EO15041 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA3EO15041 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.07■□□□□ 0.96
SEMA3EO15041 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
SEMA3EO15041 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC21.07■□□□□ 0.96
SEMA3EO15041 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA3EO15041 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA3EO15041 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
SEMA3EO15041 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SEMA3EO15041 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.07■□□□□ 0.96
SEMA3EO15041 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
SEMA3EO15041 AL590787.1-201ENST00000568856 1315 ntBASIC21.06■□□□□ 0.96
SEMA3EO15041 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC21.06■□□□□ 0.96
SEMA3EO15041 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA3EO15041 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.06■□□□□ 0.96
SEMA3EO15041 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA3EO15041 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA3EO15041 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA3EO15041 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA3EO15041 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA3EO15041 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SEMA3EO15041 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC21.06■□□□□ 0.96
SEMA3EO15041 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms