Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
TRBV5-4A0A0C4DH59 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRBV5-4A0A0C4DH59 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TRBV5-4A0A0C4DH59 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV5-4A0A0C4DH59 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRBV5-4A0A0C4DH59 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 AL355877.3-201ENST00000622820 899 ntBASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 AC108860.2-201ENST00000562760 2183 ntBASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.27■□□□□ 0.36
TRBV5-4A0A0C4DH59 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV5-4A0A0C4DH59 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.27■□□□□ 0.35
TRBV5-4A0A0C4DH59 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.27■□□□□ 0.35
TRBV5-4A0A0C4DH59 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV5-4A0A0C4DH59 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV5-4A0A0C4DH59 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.27■□□□□ 0.35
TRBV5-4A0A0C4DH59 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV5-4A0A0C4DH59 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TRBV5-4A0A0C4DH59 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRBV5-4A0A0C4DH59 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 AL135999.2-201ENST00000622438 1686 ntBASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 UNC93B7-201ENST00000509439 705 ntBASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 IFNL4P1-201ENST00000607083 540 ntBASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRBV5-4A0A0C4DH59 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 PRYP5-201ENST00000451909 266 ntBASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 SAPCD2P3-201ENST00000455031 850 ntBASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 SIGLEC30P-201ENST00000455569 941 ntBASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 FGFR3P6-201ENST00000457012 610 ntBASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.25■□□□□ 0.35
TRBV5-4A0A0C4DH59 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms