Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV27A0A087WT01 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 AK4P3-201ENST00000418260 669 ntBASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 HOMER2P1-201ENST00000455653 964 ntBASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 AC068472.1-201ENST00000474589 881 ntBASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 AC005332.3-201ENST00000589904 676 ntBASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV27A0A087WT01 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.96■□□□□ 0.14
TRAV27A0A087WT01 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV27A0A087WT01 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV27A0A087WT01 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV27A0A087WT01 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV27A0A087WT01 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.96■□□□□ 0.14
TRAV27A0A087WT01 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV27A0A087WT01 AC084018.2-201ENST00000613093 2607 ntBASIC15.96■□□□□ 0.14
TRAV27A0A087WT01 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV27A0A087WT01 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.96■□□□□ 0.14
TRAV27A0A087WT01 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 AC092647.4-201ENST00000457211 535 ntBASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 NKILA-202ENST00000614771 2598 ntBASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 AC011676.5-201ENST00000624864 2660 ntBASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV27A0A087WT01 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV27A0A087WT01 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms