Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AC097637.2-201ENST00000624096 1997 ntBASIC23.97■■□□□ 1.43
NINLQ9Y2I6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC23.97■■□□□ 1.43
NINLQ9Y2I6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
NINLQ9Y2I6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NINLQ9Y2I6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
NINLQ9Y2I6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
NINLQ9Y2I6 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
NINLQ9Y2I6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NINLQ9Y2I6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
NINLQ9Y2I6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NINLQ9Y2I6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC23.96■■□□□ 1.43
NINLQ9Y2I6 RPSAP43-201ENST00000402237 625 ntBASIC23.96■■□□□ 1.43
NINLQ9Y2I6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NINLQ9Y2I6 PRSS29P-201ENST00000440800 595 ntBASIC23.96■■□□□ 1.43
NINLQ9Y2I6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC23.96■■□□□ 1.43
NINLQ9Y2I6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC23.96■■□□□ 1.43
NINLQ9Y2I6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC23.96■■□□□ 1.43
NINLQ9Y2I6 AC064836.3-201ENST00000607928 673 ntBASIC23.96■■□□□ 1.43
NINLQ9Y2I6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
NINLQ9Y2I6 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NINLQ9Y2I6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
NINLQ9Y2I6 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NINLQ9Y2I6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
NINLQ9Y2I6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
NINLQ9Y2I6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
NINLQ9Y2I6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
NINLQ9Y2I6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC23.95■■□□□ 1.42
NINLQ9Y2I6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC23.95■■□□□ 1.42
NINLQ9Y2I6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC23.95■■□□□ 1.42
NINLQ9Y2I6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC23.95■■□□□ 1.42
NINLQ9Y2I6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC23.95■■□□□ 1.42
NINLQ9Y2I6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
NINLQ9Y2I6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC23.95■■□□□ 1.42
NINLQ9Y2I6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
NINLQ9Y2I6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
NINLQ9Y2I6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC23.95■■□□□ 1.42
NINLQ9Y2I6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC23.95■■□□□ 1.42
NINLQ9Y2I6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC23.95■■□□□ 1.42
NINLQ9Y2I6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NINLQ9Y2I6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
NINLQ9Y2I6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
NINLQ9Y2I6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NINLQ9Y2I6 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NINLQ9Y2I6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
NINLQ9Y2I6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
NINLQ9Y2I6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
NINLQ9Y2I6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
NINLQ9Y2I6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
NINLQ9Y2I6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
NINLQ9Y2I6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
NINLQ9Y2I6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC23.94■■□□□ 1.42
NINLQ9Y2I6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
NINLQ9Y2I6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC23.94■■□□□ 1.42
NINLQ9Y2I6 TK1-204ENST00000590430 683 ntTSL 3 BASIC23.94■■□□□ 1.42
NINLQ9Y2I6 AC010654.1-201ENST00000615722 808 ntBASIC23.94■■□□□ 1.42
NINLQ9Y2I6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NINLQ9Y2I6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NINLQ9Y2I6 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC23.94■■□□□ 1.42
NINLQ9Y2I6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC23.94■■□□□ 1.42
NINLQ9Y2I6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC23.94■■□□□ 1.42
NINLQ9Y2I6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
NINLQ9Y2I6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NINLQ9Y2I6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC23.94■■□□□ 1.42
NINLQ9Y2I6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC23.94■■□□□ 1.42
NINLQ9Y2I6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
NINLQ9Y2I6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
NINLQ9Y2I6 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NINLQ9Y2I6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC23.93■■□□□ 1.42
NINLQ9Y2I6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
NINLQ9Y2I6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC23.93■■□□□ 1.42
NINLQ9Y2I6 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NINLQ9Y2I6 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC23.93■■□□□ 1.42
NINLQ9Y2I6 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NINLQ9Y2I6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NINLQ9Y2I6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC23.93■■□□□ 1.42
NINLQ9Y2I6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC23.93■■□□□ 1.42
NINLQ9Y2I6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC23.93■■□□□ 1.42
NINLQ9Y2I6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NINLQ9Y2I6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NINLQ9Y2I6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC23.93■■□□□ 1.42
NINLQ9Y2I6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC23.93■■□□□ 1.42
NINLQ9Y2I6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC23.93■■□□□ 1.42
NINLQ9Y2I6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
NINLQ9Y2I6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
NINLQ9Y2I6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC23.93■■□□□ 1.42
NINLQ9Y2I6 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
NINLQ9Y2I6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NINLQ9Y2I6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
NINLQ9Y2I6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NINLQ9Y2I6 RPS8P6-201ENST00000426177 609 ntBASIC23.92■■□□□ 1.42
NINLQ9Y2I6 AC004832.2-201ENST00000426397 482 ntBASIC23.92■■□□□ 1.42
NINLQ9Y2I6 AC007967.2-201ENST00000432613 625 ntBASIC23.92■■□□□ 1.42
NINLQ9Y2I6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC23.92■■□□□ 1.42
NINLQ9Y2I6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
NINLQ9Y2I6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NINLQ9Y2I6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms