Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 AC125634.1-201ENST00000438758 1403 ntBASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 AC016396.2-201ENST00000562575 1417 ntBASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 AC103564.2-201ENST00000432853 1299 ntBASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 AC122714.2-201ENST00000502787 707 ntBASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 IGHV3-52-201ENST00000519770 353 ntBASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 AL138831.2-201ENST00000606564 490 ntBASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 AC116407.4-201ENST00000623319 1061 ntBASIC17.52■□□□□ 0.4
VPS9D1Q9Y2B5 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.52■□□□□ 0.39
VPS9D1Q9Y2B5 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.52■□□□□ 0.39
VPS9D1Q9Y2B5 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
VPS9D1Q9Y2B5 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
VPS9D1Q9Y2B5 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.52■□□□□ 0.39
VPS9D1Q9Y2B5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.52■□□□□ 0.39
VPS9D1Q9Y2B5 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
VPS9D1Q9Y2B5 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VPS9D1Q9Y2B5 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 AC007967.3-201ENST00000434308 558 ntBASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 AC010460.3-201ENST00000511359 1579 ntBASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
VPS9D1Q9Y2B5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS9D1Q9Y2B5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.5■□□□□ 0.39
VPS9D1Q9Y2B5 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
VPS9D1Q9Y2B5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS9D1Q9Y2B5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS9D1Q9Y2B5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS9D1Q9Y2B5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
VPS9D1Q9Y2B5 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
VPS9D1Q9Y2B5 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
VPS9D1Q9Y2B5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms