Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 IFNL4P1-201ENST00000607083 540 ntBASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 BX276092.7-203ENST00000637198 1536 ntBASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.05■□□□□ 0.32
CUEDC1Q9NWM3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 FZD10-202ENST00000539839 3282 ntBASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 NUS1P2-201ENST00000417358 873 ntBASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 AC009078.2-202ENST00000463353 338 ntBASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 FOSL1P1-201ENST00000511041 816 ntBASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 AC009533.2-201ENST00000543664 586 ntBASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CUEDC1Q9NWM3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 PCDHB18P-201ENST00000524813 2368 ntBASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 COX5BP2-201ENST00000392354 334 ntBASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 RCN1P2-201ENST00000398357 915 ntBASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 AL662844.1-201ENST00000546340 181 ntBASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 AC011467.2-201ENST00000598425 242 ntBASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 LINC00304-203ENST00000565008 1864 ntBASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CUEDC1Q9NWM3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
CUEDC1Q9NWM3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CUEDC1Q9NWM3 SIRPAP1-201ENST00000448467 1770 ntBASIC17.02■□□□□ 0.32
CUEDC1Q9NWM3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CUEDC1Q9NWM3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CUEDC1Q9NWM3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms