Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 MIR149-201ENST00000384879 89 ntBASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 PCDHB19P-201ENST00000570871 2371 ntBASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 AL163051.1-201ENST00000569214 1512 ntBASIC15.38■□□□□ 0.05
C12orf4Q9NQ89 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 SDHAP2-201ENST00000455183 2001 ntBASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
C12orf4Q9NQ89 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
C12orf4Q9NQ89 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
C12orf4Q9NQ89 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.36■□□□□ 0.05
C12orf4Q9NQ89 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
C12orf4Q9NQ89 AC108860.2-201ENST00000562760 2183 ntBASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms