Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.45■□□□□ 0.86
EFCC1Q9HA90 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.45■□□□□ 0.86
EFCC1Q9HA90 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.45■□□□□ 0.86
EFCC1Q9HA90 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
EFCC1Q9HA90 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
EFCC1Q9HA90 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
EFCC1Q9HA90 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.45■□□□□ 0.86
EFCC1Q9HA90 PMPCAP1-201ENST00000508114 1576 ntBASIC20.45■□□□□ 0.86
EFCC1Q9HA90 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
EFCC1Q9HA90 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EFCC1Q9HA90 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EFCC1Q9HA90 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
EFCC1Q9HA90 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 PRSS29P-201ENST00000440800 595 ntBASIC20.44■□□□□ 0.86
EFCC1Q9HA90 VN2R19P-201ENST00000442399 1052 ntBASIC20.44■□□□□ 0.86
EFCC1Q9HA90 PRYP5-201ENST00000451909 266 ntBASIC20.44■□□□□ 0.86
EFCC1Q9HA90 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 MIR4751-201ENST00000578027 74 ntBASIC20.44■□□□□ 0.86
EFCC1Q9HA90 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.44■□□□□ 0.86
EFCC1Q9HA90 ANO7L1-203ENST00000602586 1720 ntBASIC20.44■□□□□ 0.86
EFCC1Q9HA90 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 AC010460.3-201ENST00000511359 1579 ntBASIC20.43■□□□□ 0.86
EFCC1Q9HA90 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 AC004449.1-201ENST00000564240 433 ntBASIC20.43■□□□□ 0.86
EFCC1Q9HA90 AL031432.2-201ENST00000566714 459 ntBASIC20.43■□□□□ 0.86
EFCC1Q9HA90 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 AL928711.1-201ENST00000570165 459 ntBASIC20.43■□□□□ 0.86
EFCC1Q9HA90 AC138761.1-201ENST00000584393 385 ntBASIC20.43■□□□□ 0.86
EFCC1Q9HA90 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 AC093512.1-201ENST00000617969 520 ntBASIC20.43■□□□□ 0.86
EFCC1Q9HA90 AC073592.4-201ENST00000623827 446 ntBASIC20.43■□□□□ 0.86
EFCC1Q9HA90 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
EFCC1Q9HA90 GMCL1P1-201ENST00000463439 1581 ntBASIC20.42■□□□□ 0.86
EFCC1Q9HA90 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.42■□□□□ 0.86
EFCC1Q9HA90 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms