Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.85■□□□□ 0.93
NBPF3Q9H094 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.85■□□□□ 0.93
NBPF3Q9H094 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NBPF3Q9H094 FGFR3P6-201ENST00000457012 610 ntBASIC20.85■□□□□ 0.93
NBPF3Q9H094 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NBPF3Q9H094 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
NBPF3Q9H094 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.85■□□□□ 0.93
NBPF3Q9H094 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.85■□□□□ 0.93
NBPF3Q9H094 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.85■□□□□ 0.93
NBPF3Q9H094 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.85■□□□□ 0.93
NBPF3Q9H094 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NBPF3Q9H094 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NBPF3Q9H094 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NBPF3Q9H094 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NBPF3Q9H094 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.85■□□□□ 0.93
NBPF3Q9H094 HLA-J-201ENST00000462773 1622 ntBASIC20.85■□□□□ 0.93
NBPF3Q9H094 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
NBPF3Q9H094 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NBPF3Q9H094 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NBPF3Q9H094 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
NBPF3Q9H094 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NBPF3Q9H094 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NBPF3Q9H094 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NBPF3Q9H094 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.84■□□□□ 0.93
NBPF3Q9H094 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.84■□□□□ 0.93
NBPF3Q9H094 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.84■□□□□ 0.93
NBPF3Q9H094 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.84■□□□□ 0.93
NBPF3Q9H094 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NBPF3Q9H094 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NBPF3Q9H094 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
NBPF3Q9H094 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
NBPF3Q9H094 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NBPF3Q9H094 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC20.84■□□□□ 0.93
NBPF3Q9H094 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.84■□□□□ 0.93
NBPF3Q9H094 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NBPF3Q9H094 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.84■□□□□ 0.93
NBPF3Q9H094 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NBPF3Q9H094 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NBPF3Q9H094 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NBPF3Q9H094 AC103564.2-201ENST00000432853 1299 ntBASIC20.84■□□□□ 0.93
NBPF3Q9H094 AC002558.1-201ENST00000488906 803 ntBASIC20.84■□□□□ 0.93
NBPF3Q9H094 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NBPF3Q9H094 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.84■□□□□ 0.93
NBPF3Q9H094 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NBPF3Q9H094 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.84■□□□□ 0.93
NBPF3Q9H094 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
NBPF3Q9H094 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.84■□□□□ 0.93
NBPF3Q9H094 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
NBPF3Q9H094 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
NBPF3Q9H094 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NBPF3Q9H094 AC148477.5-201ENST00000625164 1645 ntBASIC20.84■□□□□ 0.93
NBPF3Q9H094 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NBPF3Q9H094 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NBPF3Q9H094 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.84■□□□□ 0.93
NBPF3Q9H094 PCDHB18P-201ENST00000524813 2368 ntBASIC20.83■□□□□ 0.93
NBPF3Q9H094 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NBPF3Q9H094 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.83■□□□□ 0.93
NBPF3Q9H094 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NBPF3Q9H094 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NBPF3Q9H094 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.83■□□□□ 0.93
NBPF3Q9H094 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.83■□□□□ 0.93
NBPF3Q9H094 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.83■□□□□ 0.93
NBPF3Q9H094 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NBPF3Q9H094 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NBPF3Q9H094 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NBPF3Q9H094 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
NBPF3Q9H094 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.83■□□□□ 0.93
NBPF3Q9H094 MIR940-201ENST00000401276 94 ntBASIC20.83■□□□□ 0.93
NBPF3Q9H094 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.83■□□□□ 0.93
NBPF3Q9H094 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.83■□□□□ 0.93
NBPF3Q9H094 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.83■□□□□ 0.93
NBPF3Q9H094 LINC01451-201ENST00000623792 534 ntBASIC20.83■□□□□ 0.93
NBPF3Q9H094 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
NBPF3Q9H094 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NBPF3Q9H094 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
NBPF3Q9H094 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NBPF3Q9H094 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NBPF3Q9H094 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NBPF3Q9H094 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NBPF3Q9H094 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.83■□□□□ 0.92
NBPF3Q9H094 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.83■□□□□ 0.92
NBPF3Q9H094 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NBPF3Q9H094 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NBPF3Q9H094 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.82■□□□□ 0.92
NBPF3Q9H094 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NBPF3Q9H094 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
NBPF3Q9H094 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NBPF3Q9H094 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.82■□□□□ 0.92
NBPF3Q9H094 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.82■□□□□ 0.92
NBPF3Q9H094 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.82■□□□□ 0.92
NBPF3Q9H094 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NBPF3Q9H094 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NBPF3Q9H094 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.82■□□□□ 0.92
NBPF3Q9H094 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.82■□□□□ 0.92
NBPF3Q9H094 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.82■□□□□ 0.92
NBPF3Q9H094 STK25P1-201ENST00000585406 838 ntBASIC20.82■□□□□ 0.92
NBPF3Q9H094 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.82■□□□□ 0.92
NBPF3Q9H094 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.82■□□□□ 0.92
NBPF3Q9H094 AL355877.3-201ENST00000622820 899 ntBASIC20.82■□□□□ 0.92
NBPF3Q9H094 AC073592.5-201ENST00000624854 528 ntBASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms