Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 AC103702.1-201ENST00000548801 2630 ntBASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.44□□□□□ -0.1
SMIM3Q9BZL3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 AC091390.4-202ENST00000476426 537 ntBASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 AC131212.4-201ENST00000623606 975 ntBASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SMIM3Q9BZL3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 AC008622.2-201ENST00000617006 1229 ntBASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 AC007326.2-201ENST00000624224 7579 ntBASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SMIM3Q9BZL3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms