Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
NDUFAF3Q9BU61 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
NDUFAF3Q9BU61 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 PPP1R14BP5-201ENST00000440334 435 ntBASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 PRSS44-201ENST00000515154 1146 ntBASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 POR-209ENST00000439269 1858 ntTSL 2 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.65□□□□□ -0.22
NDUFAF3Q9BU61 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
NDUFAF3Q9BU61 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.23
NDUFAF3Q9BU61 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NDUFAF3Q9BU61 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms