Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.68■□□□□ 0.58
RAD9AQ99638 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
RAD9AQ99638 AL513480.1-201ENST00000451731 511 ntBASIC18.68■□□□□ 0.58
RAD9AQ99638 AC002558.1-201ENST00000488906 803 ntBASIC18.68■□□□□ 0.58
RAD9AQ99638 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAD9AQ99638 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.68■□□□□ 0.58
RAD9AQ99638 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.68■□□□□ 0.58
RAD9AQ99638 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.68■□□□□ 0.58
RAD9AQ99638 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
RAD9AQ99638 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD9AQ99638 AC009093.7-201ENST00000623853 1223 ntBASIC18.68■□□□□ 0.58
RAD9AQ99638 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.68■□□□□ 0.58
RAD9AQ99638 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAD9AQ99638 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD9AQ99638 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD9AQ99638 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.68■□□□□ 0.58
RAD9AQ99638 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD9AQ99638 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.68■□□□□ 0.58
RAD9AQ99638 AL590787.1-201ENST00000568856 1315 ntBASIC18.68■□□□□ 0.58
RAD9AQ99638 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD9AQ99638 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.68■□□□□ 0.58
RAD9AQ99638 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD9AQ99638 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAD9AQ99638 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAD9AQ99638 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAD9AQ99638 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAD9AQ99638 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAD9AQ99638 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAD9AQ99638 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAD9AQ99638 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAD9AQ99638 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.67■□□□□ 0.58
RAD9AQ99638 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RAD9AQ99638 AC002056.1-201ENST00000395613 760 ntBASIC18.67■□□□□ 0.58
RAD9AQ99638 AL627223.1-201ENST00000416693 442 ntBASIC18.67■□□□□ 0.58
RAD9AQ99638 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.67■□□□□ 0.58
RAD9AQ99638 ACTG1P4-201ENST00000425123 1122 ntBASIC18.67■□□□□ 0.58
RAD9AQ99638 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.67■□□□□ 0.58
RAD9AQ99638 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAD9AQ99638 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.67■□□□□ 0.58
RAD9AQ99638 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.67■□□□□ 0.58
RAD9AQ99638 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.67■□□□□ 0.58
RAD9AQ99638 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.67■□□□□ 0.58
RAD9AQ99638 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAD9AQ99638 Z92544.3-201ENST00000624747 417 ntBASIC18.67■□□□□ 0.58
RAD9AQ99638 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAD9AQ99638 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAD9AQ99638 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAD9AQ99638 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAD9AQ99638 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAD9AQ99638 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAD9AQ99638 AC073592.3-201ENST00000625118 1834 ntBASIC18.67■□□□□ 0.58
RAD9AQ99638 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD9AQ99638 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD9AQ99638 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD9AQ99638 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAD9AQ99638 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.66■□□□□ 0.58
RAD9AQ99638 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD9AQ99638 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
RAD9AQ99638 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD9AQ99638 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RAD9AQ99638 PMS2P4-201ENST00000412466 1052 ntBASIC18.66■□□□□ 0.58
RAD9AQ99638 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.66■□□□□ 0.58
RAD9AQ99638 ADH5P3-201ENST00000433842 1137 ntBASIC18.66■□□□□ 0.58
RAD9AQ99638 TIMM8BP1-201ENST00000452384 211 ntBASIC18.66■□□□□ 0.58
RAD9AQ99638 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.66■□□□□ 0.58
RAD9AQ99638 FAM86C2P-203ENST00000528684 1004 ntBASIC18.66■□□□□ 0.58
RAD9AQ99638 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAD9AQ99638 DUX4L27-201ENST00000554796 1261 ntBASIC18.66■□□□□ 0.58
RAD9AQ99638 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.66■□□□□ 0.58
RAD9AQ99638 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.66■□□□□ 0.58
RAD9AQ99638 AL390955.2-201ENST00000603032 514 ntBASIC18.66■□□□□ 0.58
RAD9AQ99638 AC026120.1-201ENST00000611536 926 ntBASIC18.66■□□□□ 0.58
RAD9AQ99638 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD9AQ99638 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD9AQ99638 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.66■□□□□ 0.58
RAD9AQ99638 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.66■□□□□ 0.58
RAD9AQ99638 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.66■□□□□ 0.58
RAD9AQ99638 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD9AQ99638 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD9AQ99638 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RAD9AQ99638 AC100803.2-201ENST00000562459 1963 ntBASIC18.66■□□□□ 0.58
RAD9AQ99638 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD9AQ99638 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RAD9AQ99638 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD9AQ99638 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAD9AQ99638 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAD9AQ99638 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAD9AQ99638 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAD9AQ99638 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.65■□□□□ 0.58
RAD9AQ99638 AC009949.1-201ENST00000623048 1830 ntBASIC18.65■□□□□ 0.58
RAD9AQ99638 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAD9AQ99638 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAD9AQ99638 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.65■□□□□ 0.58
RAD9AQ99638 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAD9AQ99638 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAD9AQ99638 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
RAD9AQ99638 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.65■□□□□ 0.58
RAD9AQ99638 AL096828.2-201ENST00000567259 1965 ntBASIC18.65■□□□□ 0.58
RAD9AQ99638 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAD9AQ99638 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms