Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV9Q99603 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV9Q99603 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV9Q99603 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
TRGV9Q99603 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV9Q99603 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
TRGV9Q99603 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
TRGV9Q99603 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
TRGV9Q99603 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC13.74□□□□□ -0.21
TRGV9Q99603 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.74□□□□□ -0.21
TRGV9Q99603 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TRGV9Q99603 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.74□□□□□ -0.21
TRGV9Q99603 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.74□□□□□ -0.21
TRGV9Q99603 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC13.74□□□□□ -0.21
TRGV9Q99603 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.74□□□□□ -0.21
TRGV9Q99603 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 FAM8A6P-201ENST00000407496 1135 ntBASIC13.74□□□□□ -0.21
TRGV9Q99603 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
TRGV9Q99603 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.74□□□□□ -0.21
TRGV9Q99603 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.74□□□□□ -0.21
TRGV9Q99603 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.74□□□□□ -0.21
TRGV9Q99603 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 AC116353.5-201ENST00000638148 1699 ntBASIC13.74□□□□□ -0.21
TRGV9Q99603 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.74□□□□□ -0.21
TRGV9Q99603 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.74□□□□□ -0.21
TRGV9Q99603 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.74□□□□□ -0.21
TRGV9Q99603 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.74□□□□□ -0.21
TRGV9Q99603 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRGV9Q99603 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRGV9Q99603 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRGV9Q99603 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRGV9Q99603 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV9Q99603 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV9Q99603 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TRGV9Q99603 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV9Q99603 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV9Q99603 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV9Q99603 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.73□□□□□ -0.21
TRGV9Q99603 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV9Q99603 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV9Q99603 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV9Q99603 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.73□□□□□ -0.21
TRGV9Q99603 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV9Q99603 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV9Q99603 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TRGV9Q99603 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRGV9Q99603 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV9Q99603 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
TRGV9Q99603 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.73□□□□□ -0.21
TRGV9Q99603 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.73□□□□□ -0.21
TRGV9Q99603 AC002558.1-201ENST00000488906 803 ntBASIC13.73□□□□□ -0.21
TRGV9Q99603 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC13.73□□□□□ -0.21
TRGV9Q99603 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.73□□□□□ -0.21
TRGV9Q99603 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRGV9Q99603 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV9Q99603 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV9Q99603 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV9Q99603 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.73□□□□□ -0.21
TRGV9Q99603 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV9Q99603 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRGV9Q99603 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV9Q99603 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
TRGV9Q99603 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV9Q99603 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV9Q99603 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRGV9Q99603 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC13.73□□□□□ -0.21
TRGV9Q99603 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV9Q99603 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.72□□□□□ -0.21
TRGV9Q99603 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV9Q99603 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
TRGV9Q99603 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV9Q99603 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV9Q99603 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
TRGV9Q99603 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.72□□□□□ -0.21
TRGV9Q99603 CROCCP1-201ENST00000426910 5675 ntBASIC13.72□□□□□ -0.21
TRGV9Q99603 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV9Q99603 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV9Q99603 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRGV9Q99603 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TRGV9Q99603 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms