Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 STK25P1-201ENST00000585406 838 ntBASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 AC064836.3-201ENST00000607928 673 ntBASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 HTR7P1-202ENST00000624664 4411 ntBASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC85AQ96PX6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 AC005104.2-201ENST00000427818 678 ntBASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 SIGLEC30P-201ENST00000455569 941 ntBASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 S100A2-206ENST00000497140 697 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 RNA5SP416-201ENST00000516838 111 ntBASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC85AQ96PX6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 YBX2P1-201ENST00000394192 760 ntBASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 DDX43P3-201ENST00000441064 443 ntBASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 AC138932.1-201ENST00000534164 6830 ntBASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 AC097637.2-201ENST00000624096 1997 ntBASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC85AQ96PX6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 IGHV3-52-201ENST00000519770 353 ntBASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 AL691403.2-201ENST00000618460 490 ntBASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC85AQ96PX6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms