Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 AL139327.4-201ENST00000612362 153 ntBASIC14.64□□□□□ -0.07
GAFA1Q96PS6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.64□□□□□ -0.07
GAFA1Q96PS6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.63□□□□□ -0.07
GAFA1Q96PS6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 STK25P1-201ENST00000585406 838 ntBASIC14.63□□□□□ -0.07
GAFA1Q96PS6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 AC073592.5-201ENST00000624854 528 ntBASIC14.63□□□□□ -0.07
GAFA1Q96PS6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 AL138688.1-201ENST00000624851 1594 ntBASIC14.63□□□□□ -0.07
GAFA1Q96PS6 LYSMD4-203ENST00000378904 2122 ntBASIC14.63□□□□□ -0.07
GAFA1Q96PS6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
GAFA1Q96PS6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 DUSP5P1-201ENST00000441325 1139 ntBASIC14.62□□□□□ -0.07
GAFA1Q96PS6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 ABCD1P5-201ENST00000445663 754 ntBASIC14.62□□□□□ -0.07
GAFA1Q96PS6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 AC132008.2-207ENST00000454517 770 ntBASIC14.62□□□□□ -0.07
GAFA1Q96PS6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.62□□□□□ -0.07
GAFA1Q96PS6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms