Protein–RNA interactions for Protein: Q969X6

UTP4, U3 small nucleolar RNA-associated protein 4 homolog, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UTP4Q969X6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UTP4Q969X6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
UTP4Q969X6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.9■□□□□ 0.3
UTP4Q969X6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UTP4Q969X6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.9■□□□□ 0.3
UTP4Q969X6 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.9■□□□□ 0.3
UTP4Q969X6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UTP4Q969X6 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UTP4Q969X6 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UTP4Q969X6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
UTP4Q969X6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UTP4Q969X6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
UTP4Q969X6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.9■□□□□ 0.3
UTP4Q969X6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UTP4Q969X6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.9■□□□□ 0.3
UTP4Q969X6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UTP4Q969X6 MTDHP1-201ENST00000605323 784 ntBASIC16.9■□□□□ 0.3
UTP4Q969X6 AC011298.2-201ENST00000617989 482 ntBASIC16.9■□□□□ 0.3
UTP4Q969X6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.9■□□□□ 0.3
UTP4Q969X6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UTP4Q969X6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UTP4Q969X6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
UTP4Q969X6 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UTP4Q969X6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UTP4Q969X6 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UTP4Q969X6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.9■□□□□ 0.3
UTP4Q969X6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.9■□□□□ 0.3
UTP4Q969X6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UTP4Q969X6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
UTP4Q969X6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
UTP4Q969X6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.9■□□□□ 0.3
UTP4Q969X6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.9■□□□□ 0.3
UTP4Q969X6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
UTP4Q969X6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
UTP4Q969X6 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
UTP4Q969X6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.89■□□□□ 0.3
UTP4Q969X6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
UTP4Q969X6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
UTP4Q969X6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
UTP4Q969X6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.3
UTP4Q969X6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
UTP4Q969X6 HCG11-201ENST00000411553 5696 ntBASIC16.89■□□□□ 0.29
UTP4Q969X6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UTP4Q969X6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
UTP4Q969X6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
UTP4Q969X6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UTP4Q969X6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UTP4Q969X6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.89■□□□□ 0.29
UTP4Q969X6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UTP4Q969X6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
UTP4Q969X6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UTP4Q969X6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.89■□□□□ 0.29
UTP4Q969X6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.89■□□□□ 0.29
UTP4Q969X6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC16.89■□□□□ 0.29
UTP4Q969X6 KRT16P5-201ENST00000455284 522 ntBASIC16.89■□□□□ 0.29
UTP4Q969X6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
UTP4Q969X6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.89■□□□□ 0.29
UTP4Q969X6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
UTP4Q969X6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.89■□□□□ 0.29
UTP4Q969X6 MIR5787-201ENST00000611784 55 ntBASIC16.89■□□□□ 0.29
UTP4Q969X6 AC116407.2-201ENST00000613639 860 ntBASIC16.89■□□□□ 0.29
UTP4Q969X6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.89■□□□□ 0.29
UTP4Q969X6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UTP4Q969X6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UTP4Q969X6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UTP4Q969X6 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UTP4Q969X6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.89■□□□□ 0.29
UTP4Q969X6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UTP4Q969X6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
UTP4Q969X6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
UTP4Q969X6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UTP4Q969X6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UTP4Q969X6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.89■□□□□ 0.29
UTP4Q969X6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.89■□□□□ 0.29
UTP4Q969X6 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UTP4Q969X6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UTP4Q969X6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UTP4Q969X6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
UTP4Q969X6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
UTP4Q969X6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
UTP4Q969X6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UTP4Q969X6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.88■□□□□ 0.29
UTP4Q969X6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
UTP4Q969X6 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
UTP4Q969X6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
UTP4Q969X6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
UTP4Q969X6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
UTP4Q969X6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UTP4Q969X6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
UTP4Q969X6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.88■□□□□ 0.29
UTP4Q969X6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UTP4Q969X6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.88■□□□□ 0.29
UTP4Q969X6 NIFKP9-201ENST00000419265 221 ntBASIC16.88■□□□□ 0.29
UTP4Q969X6 NCF1B-203ENST00000435988 1254 ntBASIC16.88■□□□□ 0.29
UTP4Q969X6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.88■□□□□ 0.29
UTP4Q969X6 AC006970.2-201ENST00000450065 779 ntBASIC16.88■□□□□ 0.29
UTP4Q969X6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
UTP4Q969X6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC16.88■□□□□ 0.29
UTP4Q969X6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.88■□□□□ 0.29
UTP4Q969X6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms