Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
USP6NLQ92738 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.83■□□□□ 0.77
USP6NLQ92738 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP6NLQ92738 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP6NLQ92738 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP6NLQ92738 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP6NLQ92738 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP6NLQ92738 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP6NLQ92738 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP6NLQ92738 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.83■□□□□ 0.77
USP6NLQ92738 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP6NLQ92738 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
USP6NLQ92738 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.83■□□□□ 0.77
USP6NLQ92738 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
USP6NLQ92738 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.83■□□□□ 0.77
USP6NLQ92738 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP6NLQ92738 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP6NLQ92738 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.83■□□□□ 0.76
USP6NLQ92738 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP6NLQ92738 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.83■□□□□ 0.76
USP6NLQ92738 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
USP6NLQ92738 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP6NLQ92738 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP6NLQ92738 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
USP6NLQ92738 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
USP6NLQ92738 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.83■□□□□ 0.76
USP6NLQ92738 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP6NLQ92738 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP6NLQ92738 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
USP6NLQ92738 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.82■□□□□ 0.76
USP6NLQ92738 REM2-202ENST00000536884 1331 ntTSL 2 BASIC19.82■□□□□ 0.76
USP6NLQ92738 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
USP6NLQ92738 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP6NLQ92738 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
USP6NLQ92738 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP6NLQ92738 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.82■□□□□ 0.76
USP6NLQ92738 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.82■□□□□ 0.76
USP6NLQ92738 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.82■□□□□ 0.76
USP6NLQ92738 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP6NLQ92738 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.82■□□□□ 0.76
USP6NLQ92738 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP6NLQ92738 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.82■□□□□ 0.76
USP6NLQ92738 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP6NLQ92738 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP6NLQ92738 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP6NLQ92738 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP6NLQ92738 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP6NLQ92738 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP6NLQ92738 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP6NLQ92738 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP6NLQ92738 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP6NLQ92738 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP6NLQ92738 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP6NLQ92738 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
USP6NLQ92738 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.81■□□□□ 0.76
USP6NLQ92738 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP6NLQ92738 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
USP6NLQ92738 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP6NLQ92738 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP6NLQ92738 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.81■□□□□ 0.76
USP6NLQ92738 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.81■□□□□ 0.76
USP6NLQ92738 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.81■□□□□ 0.76
USP6NLQ92738 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.81■□□□□ 0.76
USP6NLQ92738 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.81■□□□□ 0.76
USP6NLQ92738 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP6NLQ92738 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.81■□□□□ 0.76
USP6NLQ92738 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP6NLQ92738 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.81■□□□□ 0.76
USP6NLQ92738 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP6NLQ92738 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP6NLQ92738 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP6NLQ92738 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP6NLQ92738 BX276092.7-203ENST00000637198 1536 ntBASIC19.81■□□□□ 0.76
USP6NLQ92738 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
USP6NLQ92738 AL096828.2-201ENST00000567259 1965 ntBASIC19.81■□□□□ 0.76
USP6NLQ92738 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP6NLQ92738 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.81■□□□□ 0.76
USP6NLQ92738 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.81■□□□□ 0.76
USP6NLQ92738 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP6NLQ92738 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP6NLQ92738 AC093503.3-201ENST00000624917 2352 ntBASIC19.8■□□□□ 0.76
USP6NLQ92738 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.8■□□□□ 0.76
USP6NLQ92738 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP6NLQ92738 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP6NLQ92738 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP6NLQ92738 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
USP6NLQ92738 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
USP6NLQ92738 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP6NLQ92738 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP6NLQ92738 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.8■□□□□ 0.76
USP6NLQ92738 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.8■□□□□ 0.76
USP6NLQ92738 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP6NLQ92738 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP6NLQ92738 DDX43P3-201ENST00000441064 443 ntBASIC19.8■□□□□ 0.76
USP6NLQ92738 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
USP6NLQ92738 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP6NLQ92738 CXCL1P1-201ENST00000502804 216 ntBASIC19.8■□□□□ 0.76
USP6NLQ92738 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.8■□□□□ 0.76
USP6NLQ92738 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.8■□□□□ 0.76
USP6NLQ92738 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms