Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.84■□□□□ 0.93
SH3RF3Q8TEJ3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 AC108073.2-201ENST00000464002 357 ntBASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 RNA5SP416-201ENST00000516838 111 ntBASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 AL353135.1-201ENST00000606729 504 ntBASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 AC064836.3-201ENST00000607928 673 ntBASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SH3RF3Q8TEJ3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SH3RF3Q8TEJ3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
SH3RF3Q8TEJ3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SH3RF3Q8TEJ3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SH3RF3Q8TEJ3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SH3RF3Q8TEJ3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.83■□□□□ 0.92
SH3RF3Q8TEJ3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SH3RF3Q8TEJ3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
SH3RF3Q8TEJ3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SH3RF3Q8TEJ3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SH3RF3Q8TEJ3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
SH3RF3Q8TEJ3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SH3RF3Q8TEJ3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.82■□□□□ 0.92
SH3RF3Q8TEJ3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SH3RF3Q8TEJ3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SH3RF3Q8TEJ3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.82■□□□□ 0.92
SH3RF3Q8TEJ3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SH3RF3Q8TEJ3 AC012317.2-201ENST00000623305 2251 ntBASIC20.82■□□□□ 0.92
SH3RF3Q8TEJ3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.82■□□□□ 0.92
SH3RF3Q8TEJ3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SH3RF3Q8TEJ3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.82■□□□□ 0.92
SH3RF3Q8TEJ3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.82■□□□□ 0.92
SH3RF3Q8TEJ3 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.82■□□□□ 0.92
SH3RF3Q8TEJ3 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.82■□□□□ 0.92
SH3RF3Q8TEJ3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.82■□□□□ 0.92
SH3RF3Q8TEJ3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.82■□□□□ 0.92
SH3RF3Q8TEJ3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SH3RF3Q8TEJ3 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SH3RF3Q8TEJ3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SH3RF3Q8TEJ3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3RF3Q8TEJ3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SH3RF3Q8TEJ3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.81■□□□□ 0.92
SH3RF3Q8TEJ3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.81■□□□□ 0.92
SH3RF3Q8TEJ3 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.81■□□□□ 0.92
SH3RF3Q8TEJ3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3RF3Q8TEJ3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3RF3Q8TEJ3 PTCHD3P3-201ENST00000403073 906 ntBASIC20.81■□□□□ 0.92
SH3RF3Q8TEJ3 AC023274.1-201ENST00000418278 595 ntBASIC20.81■□□□□ 0.92
SH3RF3Q8TEJ3 IGHV3-65-201ENST00000523210 341 ntBASIC20.81■□□□□ 0.92
SH3RF3Q8TEJ3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
SH3RF3Q8TEJ3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.81■□□□□ 0.92
SH3RF3Q8TEJ3 AC008667.4-201ENST00000607370 168 ntBASIC20.81■□□□□ 0.92
SH3RF3Q8TEJ3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SH3RF3Q8TEJ3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3RF3Q8TEJ3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SH3RF3Q8TEJ3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.81■□□□□ 0.92
SH3RF3Q8TEJ3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
SH3RF3Q8TEJ3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SH3RF3Q8TEJ3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SH3RF3Q8TEJ3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.8■□□□□ 0.92
SH3RF3Q8TEJ3 MIR1233-2-201ENST00000408138 82 ntBASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms