Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 AC138028.4-201ENST00000564984 1845 ntBASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 AC139713.2-201ENST00000641328 2723 ntBASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 KRT18P55-202ENST00000578578 1546 ntBASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
PCDH20Q8N6Y1 AC100803.2-201ENST00000562459 1963 ntBASIC18■□□□□ 0.47
PCDH20Q8N6Y1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 COX5BP2-201ENST00000392354 334 ntBASIC18■□□□□ 0.47
PCDH20Q8N6Y1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 DDX43P3-201ENST00000441064 443 ntBASIC18■□□□□ 0.47
PCDH20Q8N6Y1 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH20Q8N6Y1 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 RBM17P3-201ENST00000417687 1192 ntBASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 AL121912.1-201ENST00000603683 238 ntBASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH20Q8N6Y1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH20Q8N6Y1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms