Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
UBR1Q8IWV7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC24.76■■□□□ 1.55
UBR1Q8IWV7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
UBR1Q8IWV7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
UBR1Q8IWV7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
UBR1Q8IWV7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC24.76■■□□□ 1.55
UBR1Q8IWV7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
UBR1Q8IWV7 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
UBR1Q8IWV7 AC093677.2-201ENST00000600169 1863 ntBASIC24.76■■□□□ 1.55
UBR1Q8IWV7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
UBR1Q8IWV7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
UBR1Q8IWV7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC24.76■■□□□ 1.55
UBR1Q8IWV7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
UBR1Q8IWV7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
UBR1Q8IWV7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
UBR1Q8IWV7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 RN7SL692P-201ENST00000464677 288 ntBASIC24.75■■□□□ 1.55
UBR1Q8IWV7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 IGHV3-42-201ENST00000520410 361 ntBASIC24.75■■□□□ 1.55
UBR1Q8IWV7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 AL009183.1-201ENST00000603760 355 ntBASIC24.75■■□□□ 1.55
UBR1Q8IWV7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 SERBP1P5-201ENST00000510079 1181 ntBASIC24.75■■□□□ 1.55
UBR1Q8IWV7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC24.75■■□□□ 1.55
UBR1Q8IWV7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
UBR1Q8IWV7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
UBR1Q8IWV7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
UBR1Q8IWV7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
UBR1Q8IWV7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
UBR1Q8IWV7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
UBR1Q8IWV7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
UBR1Q8IWV7 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC24.74■■□□□ 1.55
UBR1Q8IWV7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC24.74■■□□□ 1.55
UBR1Q8IWV7 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
UBR1Q8IWV7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
UBR1Q8IWV7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
UBR1Q8IWV7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC24.74■■□□□ 1.55
UBR1Q8IWV7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC24.74■■□□□ 1.55
UBR1Q8IWV7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
UBR1Q8IWV7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
UBR1Q8IWV7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
UBR1Q8IWV7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
UBR1Q8IWV7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
UBR1Q8IWV7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
UBR1Q8IWV7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC24.73■■□□□ 1.55
UBR1Q8IWV7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC24.73■■□□□ 1.55
UBR1Q8IWV7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
UBR1Q8IWV7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
UBR1Q8IWV7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC24.73■■□□□ 1.55
UBR1Q8IWV7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
UBR1Q8IWV7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
UBR1Q8IWV7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC24.73■■□□□ 1.55
UBR1Q8IWV7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
UBR1Q8IWV7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC24.73■■□□□ 1.55
UBR1Q8IWV7 SPDYE7P-202ENST00000420373 878 ntBASIC24.72■■□□□ 1.55
UBR1Q8IWV7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
UBR1Q8IWV7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
UBR1Q8IWV7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
UBR1Q8IWV7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC24.72■■□□□ 1.55
UBR1Q8IWV7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC24.72■■□□□ 1.55
UBR1Q8IWV7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
UBR1Q8IWV7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
UBR1Q8IWV7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
UBR1Q8IWV7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC24.72■■□□□ 1.55
UBR1Q8IWV7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
UBR1Q8IWV7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC24.72■■□□□ 1.55
UBR1Q8IWV7 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
UBR1Q8IWV7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
UBR1Q8IWV7 AC097493.3-201ENST00000509725 367 ntBASIC24.72■■□□□ 1.55
UBR1Q8IWV7 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC24.72■■□□□ 1.55
UBR1Q8IWV7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC24.72■■□□□ 1.55
UBR1Q8IWV7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
UBR1Q8IWV7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
UBR1Q8IWV7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC24.71■■□□□ 1.55
UBR1Q8IWV7 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC24.71■■□□□ 1.55
UBR1Q8IWV7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC24.71■■□□□ 1.55
UBR1Q8IWV7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
UBR1Q8IWV7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC24.71■■□□□ 1.55
UBR1Q8IWV7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC24.71■■□□□ 1.55
UBR1Q8IWV7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
UBR1Q8IWV7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC24.71■■□□□ 1.55
UBR1Q8IWV7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms