Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.62■□□□□ 0.41
CRLF3Q8IUI8 AP003041.3-201ENST00000527151 707 ntBASIC17.62■□□□□ 0.41
CRLF3Q8IUI8 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CRLF3Q8IUI8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRLF3Q8IUI8 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRLF3Q8IUI8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CRLF3Q8IUI8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRLF3Q8IUI8 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRLF3Q8IUI8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CRLF3Q8IUI8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CRLF3Q8IUI8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CRLF3Q8IUI8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.62■□□□□ 0.41
CRLF3Q8IUI8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CRLF3Q8IUI8 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.62■□□□□ 0.41
CRLF3Q8IUI8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRLF3Q8IUI8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRLF3Q8IUI8 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRLF3Q8IUI8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRLF3Q8IUI8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRLF3Q8IUI8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CRLF3Q8IUI8 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
CRLF3Q8IUI8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 ARMC10P1-201ENST00000313754 855 ntBASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 AL138966.2-201ENST00000621997 464 ntBASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CRLF3Q8IUI8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 MIR3180-4-201ENST00000582223 153 ntBASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 LINC01451-201ENST00000623792 534 ntBASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.6■□□□□ 0.41
CRLF3Q8IUI8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CRLF3Q8IUI8 AC018695.7-201ENST00000624587 2492 ntBASIC17.59■□□□□ 0.41
CRLF3Q8IUI8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms