Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM88Q6PEY1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM88Q6PEY1 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM88Q6PEY1 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM88Q6PEY1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM88Q6PEY1 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM88Q6PEY1 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM88Q6PEY1 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TMEM88Q6PEY1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM88Q6PEY1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 POU5F1P3-201ENST00000428824 1078 ntBASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TMEM88Q6PEY1 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 CICP4-201ENST00000447359 2812 ntBASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 AC092068.3-201ENST00000587894 2016 ntBASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 C2orf69P4-201ENST00000565394 541 ntBASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 AC060766.5-201ENST00000590539 871 ntBASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 TMEM191A-211ENST00000637163 1067 ntBASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 HLA-B-256ENST00000639848 1089 ntBASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 AC092368.3-202ENST00000574180 1591 ntBASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TMEM88Q6PEY1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.25□□□□□ -0.13
TMEM88Q6PEY1 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms