Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 AC093484.2-201ENST00000580996 2166 ntBASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTCRAQ6ISU1 AL590787.1-201ENST00000568856 1315 ntBASIC18■□□□□ 0.47
PTCRAQ6ISU1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTCRAQ6ISU1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PTCRAQ6ISU1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18■□□□□ 0.47
PTCRAQ6ISU1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
PTCRAQ6ISU1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
PTCRAQ6ISU1 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PTCRAQ6ISU1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PTCRAQ6ISU1 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PTCRAQ6ISU1 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18■□□□□ 0.47
PTCRAQ6ISU1 DUTP2-201ENST00000519164 463 ntBASIC18■□□□□ 0.47
PTCRAQ6ISU1 IGHV3-62-201ENST00000520057 340 ntBASIC18■□□□□ 0.47
PTCRAQ6ISU1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18■□□□□ 0.47
PTCRAQ6ISU1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18■□□□□ 0.47
PTCRAQ6ISU1 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18■□□□□ 0.47
PTCRAQ6ISU1 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18■□□□□ 0.47
PTCRAQ6ISU1 MIR6799-201ENST00000620297 69 ntBASIC18■□□□□ 0.47
PTCRAQ6ISU1 AC012183.1-201ENST00000625197 499 ntBASIC18■□□□□ 0.47
PTCRAQ6ISU1 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTCRAQ6ISU1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTCRAQ6ISU1 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
PTCRAQ6ISU1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PTCRAQ6ISU1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTCRAQ6ISU1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
PTCRAQ6ISU1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18■□□□□ 0.47
PTCRAQ6ISU1 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18■□□□□ 0.47
PTCRAQ6ISU1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PTCRAQ6ISU1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PTCRAQ6ISU1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 AKAP8P1-201ENST00000434743 1349 ntBASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 AC245100.3-201ENST00000441281 285 ntBASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 RARRES2P8-201ENST00000566335 367 ntBASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCRAQ6ISU1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 AC093010.1-201ENST00000473625 1624 ntBASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 SPCS2P4-201ENST00000436160 681 ntBASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 UXT-AS1-201ENST00000590504 1525 ntBASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCRAQ6ISU1 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.97■□□□□ 0.47
PTCRAQ6ISU1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms