Protein–RNA interactions for Protein: Q6IQ49

SDE2, Protein SDE2 homolog, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2Q6IQ49 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SDE2Q6IQ49 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SDE2Q6IQ49 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SDE2Q6IQ49 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SDE2Q6IQ49 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.45
SDE2Q6IQ49 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SDE2Q6IQ49 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
SDE2Q6IQ49 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.83■□□□□ 0.45
SDE2Q6IQ49 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SDE2Q6IQ49 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SDE2Q6IQ49 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.83■□□□□ 0.44
SDE2Q6IQ49 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SDE2Q6IQ49 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SDE2Q6IQ49 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
SDE2Q6IQ49 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SDE2Q6IQ49 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.83■□□□□ 0.44
SDE2Q6IQ49 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SDE2Q6IQ49 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SDE2Q6IQ49 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.83■□□□□ 0.44
SDE2Q6IQ49 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.83■□□□□ 0.44
SDE2Q6IQ49 UPF3AP3-201ENST00000420996 769 ntBASIC17.83■□□□□ 0.44
SDE2Q6IQ49 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.83■□□□□ 0.44
SDE2Q6IQ49 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SDE2Q6IQ49 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.83■□□□□ 0.44
SDE2Q6IQ49 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC17.83■□□□□ 0.44
SDE2Q6IQ49 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SDE2Q6IQ49 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.83■□□□□ 0.44
SDE2Q6IQ49 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
SDE2Q6IQ49 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SDE2Q6IQ49 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SDE2Q6IQ49 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.83■□□□□ 0.44
SDE2Q6IQ49 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
SDE2Q6IQ49 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 BX276092.7-203ENST00000637198 1536 ntBASIC17.82■□□□□ 0.44
SDE2Q6IQ49 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 TNXA-203ENST00000507684 2038 ntBASIC17.82■□□□□ 0.44
SDE2Q6IQ49 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 NCF1C-201ENST00000438382 1427 ntBASIC17.82■□□□□ 0.44
SDE2Q6IQ49 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 KRT18P27-201ENST00000427733 1299 ntBASIC17.82■□□□□ 0.44
SDE2Q6IQ49 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 AC108751.1-201ENST00000490852 363 ntBASIC17.82■□□□□ 0.44
SDE2Q6IQ49 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 AL691403.2-201ENST00000618460 490 ntBASIC17.82■□□□□ 0.44
SDE2Q6IQ49 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 AL049757.1-201ENST00000616842 1596 ntBASIC17.82■□□□□ 0.44
SDE2Q6IQ49 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDE2Q6IQ49 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 AC073621.1-201ENST00000392730 636 ntBASIC17.81■□□□□ 0.44
SDE2Q6IQ49 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 AC002347.1-201ENST00000569543 541 ntBASIC17.81■□□□□ 0.44
SDE2Q6IQ49 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 AC079781.4-201ENST00000641908 219 ntBASIC17.81■□□□□ 0.44
SDE2Q6IQ49 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.81■□□□□ 0.44
SDE2Q6IQ49 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SDE2Q6IQ49 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms