Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC005336.2-201ENST00000593183 939 ntBASIC21.04■□□□□ 0.96
RNF20Q5VTR2 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF20Q5VTR2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 SIRPAP1-201ENST00000448467 1770 ntBASIC21.03■□□□□ 0.96
RNF20Q5VTR2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF20Q5VTR2 CROCCP2-202ENST00000412962 2773 ntBASIC21.02■□□□□ 0.96
RNF20Q5VTR2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF20Q5VTR2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF20Q5VTR2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF20Q5VTR2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC21.02■□□□□ 0.96
RNF20Q5VTR2 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF20Q5VTR2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF20Q5VTR2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF20Q5VTR2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF20Q5VTR2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF20Q5VTR2 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF20Q5VTR2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF20Q5VTR2 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
RNF20Q5VTR2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RNF20Q5VTR2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF20Q5VTR2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.02■□□□□ 0.96
RNF20Q5VTR2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF20Q5VTR2 AP000550.4-202ENST00000639755 178 ntBASIC21.02■□□□□ 0.96
RNF20Q5VTR2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF20Q5VTR2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF20Q5VTR2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF20Q5VTR2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF20Q5VTR2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF20Q5VTR2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF20Q5VTR2 KRT18P1-202ENST00000452408 1331 ntBASIC21.02■□□□□ 0.95
RNF20Q5VTR2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 LYSMD4-203ENST00000378904 2122 ntBASIC21.01■□□□□ 0.95
RNF20Q5VTR2 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 MYCLP1-201ENST00000372451 1075 ntBASIC21.01■□□□□ 0.95
RNF20Q5VTR2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 AC122714.2-201ENST00000502787 707 ntBASIC21.01■□□□□ 0.95
RNF20Q5VTR2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.01■□□□□ 0.95
RNF20Q5VTR2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
RNF20Q5VTR2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms