Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
USH1GQ495M9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USH1GQ495M9 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
USH1GQ495M9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
USH1GQ495M9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USH1GQ495M9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
USH1GQ495M9 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USH1GQ495M9 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USH1GQ495M9 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USH1GQ495M9 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.2■□□□□ 0.82
USH1GQ495M9 RPL13AP23-201ENST00000480739 586 ntBASIC20.2■□□□□ 0.82
USH1GQ495M9 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.2■□□□□ 0.82
USH1GQ495M9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.2■□□□□ 0.82
USH1GQ495M9 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.2■□□□□ 0.82
USH1GQ495M9 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.2■□□□□ 0.82
USH1GQ495M9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USH1GQ495M9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
USH1GQ495M9 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
USH1GQ495M9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.2■□□□□ 0.82
USH1GQ495M9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.2■□□□□ 0.82
USH1GQ495M9 AC012317.2-201ENST00000623305 2251 ntBASIC20.2■□□□□ 0.82
USH1GQ495M9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USH1GQ495M9 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
USH1GQ495M9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
USH1GQ495M9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USH1GQ495M9 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USH1GQ495M9 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
USH1GQ495M9 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
USH1GQ495M9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC20.2■□□□□ 0.82
USH1GQ495M9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USH1GQ495M9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USH1GQ495M9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USH1GQ495M9 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USH1GQ495M9 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USH1GQ495M9 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USH1GQ495M9 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.19■□□□□ 0.82
USH1GQ495M9 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.19■□□□□ 0.82
USH1GQ495M9 AC098831.1-202ENST00000438821 336 ntBASIC20.19■□□□□ 0.82
USH1GQ495M9 IGHV3-52-201ENST00000519770 353 ntBASIC20.19■□□□□ 0.82
USH1GQ495M9 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USH1GQ495M9 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.19■□□□□ 0.82
USH1GQ495M9 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.19■□□□□ 0.82
USH1GQ495M9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.19■□□□□ 0.82
USH1GQ495M9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USH1GQ495M9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
USH1GQ495M9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USH1GQ495M9 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USH1GQ495M9 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USH1GQ495M9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
USH1GQ495M9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.19■□□□□ 0.82
USH1GQ495M9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USH1GQ495M9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USH1GQ495M9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USH1GQ495M9 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USH1GQ495M9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.18■□□□□ 0.82
USH1GQ495M9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USH1GQ495M9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USH1GQ495M9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
USH1GQ495M9 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USH1GQ495M9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
USH1GQ495M9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.18■□□□□ 0.82
USH1GQ495M9 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USH1GQ495M9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.18■□□□□ 0.82
USH1GQ495M9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.18■□□□□ 0.82
USH1GQ495M9 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USH1GQ495M9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USH1GQ495M9 AC003669.1-201ENST00000334569 611 ntBASIC20.18■□□□□ 0.82
USH1GQ495M9 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USH1GQ495M9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.18■□□□□ 0.82
USH1GQ495M9 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.18■□□□□ 0.82
USH1GQ495M9 LAGE3P1-201ENST00000425356 484 ntBASIC20.18■□□□□ 0.82
USH1GQ495M9 STK19B-204ENST00000512515 211 ntBASIC20.18■□□□□ 0.82
USH1GQ495M9 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.18■□□□□ 0.82
USH1GQ495M9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.18■□□□□ 0.82
USH1GQ495M9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
USH1GQ495M9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USH1GQ495M9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
USH1GQ495M9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
USH1GQ495M9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
USH1GQ495M9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USH1GQ495M9 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USH1GQ495M9 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
USH1GQ495M9 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
USH1GQ495M9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
USH1GQ495M9 REXO1L11P-201ENST00000620964 1927 ntBASIC20.17■□□□□ 0.82
USH1GQ495M9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
USH1GQ495M9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USH1GQ495M9 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.17■□□□□ 0.82
USH1GQ495M9 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
USH1GQ495M9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
USH1GQ495M9 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
USH1GQ495M9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.17■□□□□ 0.82
USH1GQ495M9 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.17■□□□□ 0.82
USH1GQ495M9 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
USH1GQ495M9 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.17■□□□□ 0.82
USH1GQ495M9 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.17■□□□□ 0.82
USH1GQ495M9 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
USH1GQ495M9 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.17■□□□□ 0.82
USH1GQ495M9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.17■□□□□ 0.82
USH1GQ495M9 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms