Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 AL445675.2-201ENST00000620291 557 ntBASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 AC009949.1-201ENST00000623048 1830 ntBASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ERCC6LQ2NKX8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 AL136379.1-201ENST00000623471 2642 ntBASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ERCC6LQ2NKX8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 AC133041.1-202ENST00000642053 222 ntBASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ERCC6LQ2NKX8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 AL355802.2-201ENST00000402069 882 ntBASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 HLA-L-209ENST00000420110 1011 ntBASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 MYC-209ENST00000641252 345 ntBASIC18.66■□□□□ 0.58
ERCC6LQ2NKX8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms