Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CDH17Q12864 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.8■□□□□ 0.44
CDH17Q12864 BX276092.5-203ENST00000456199 560 ntBASIC17.8■□□□□ 0.44
CDH17Q12864 FAM86EP-206ENST00000510506 987 ntBASIC17.8■□□□□ 0.44
CDH17Q12864 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.8■□□□□ 0.44
CDH17Q12864 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.8■□□□□ 0.44
CDH17Q12864 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.8■□□□□ 0.44
CDH17Q12864 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.8■□□□□ 0.44
CDH17Q12864 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.8■□□□□ 0.44
CDH17Q12864 AL121672.3-201ENST00000608644 468 ntBASIC17.8■□□□□ 0.44
CDH17Q12864 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.8■□□□□ 0.44
CDH17Q12864 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH17Q12864 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH17Q12864 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
CDH17Q12864 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDH17Q12864 AC016396.2-201ENST00000562575 1417 ntBASIC17.8■□□□□ 0.44
CDH17Q12864 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.8■□□□□ 0.44
CDH17Q12864 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CDH17Q12864 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH17Q12864 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH17Q12864 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH17Q12864 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH17Q12864 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH17Q12864 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH17Q12864 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CDH17Q12864 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH17Q12864 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH17Q12864 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH17Q12864 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH17Q12864 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH17Q12864 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH17Q12864 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH17Q12864 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH17Q12864 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH17Q12864 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH17Q12864 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.79■□□□□ 0.44
CDH17Q12864 AL845331.1-201ENST00000424978 1190 ntBASIC17.79■□□□□ 0.44
CDH17Q12864 AC246785.2-201ENST00000432512 513 ntBASIC17.79■□□□□ 0.44
CDH17Q12864 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH17Q12864 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.79■□□□□ 0.44
CDH17Q12864 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.79■□□□□ 0.44
CDH17Q12864 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CDH17Q12864 AL138831.2-201ENST00000606564 490 ntBASIC17.79■□□□□ 0.44
CDH17Q12864 AL139327.4-201ENST00000612362 153 ntBASIC17.79■□□□□ 0.44
CDH17Q12864 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDH17Q12864 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CDH17Q12864 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH17Q12864 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH17Q12864 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH17Q12864 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.79■□□□□ 0.44
CDH17Q12864 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH17Q12864 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.79■□□□□ 0.44
CDH17Q12864 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
CDH17Q12864 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH17Q12864 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH17Q12864 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CDH17Q12864 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDH17Q12864 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH17Q12864 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH17Q12864 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CDH17Q12864 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH17Q12864 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH17Q12864 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH17Q12864 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH17Q12864 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH17Q12864 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CDH17Q12864 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH17Q12864 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CDH17Q12864 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CDH17Q12864 CHCHD2P8-201ENST00000429873 447 ntBASIC17.78■□□□□ 0.44
CDH17Q12864 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
CDH17Q12864 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.78■□□□□ 0.44
CDH17Q12864 AC005336.2-201ENST00000593183 939 ntBASIC17.78■□□□□ 0.44
CDH17Q12864 AL590326.2-201ENST00000625139 305 ntBASIC17.78■□□□□ 0.44
CDH17Q12864 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH17Q12864 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CDH17Q12864 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH17Q12864 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH17Q12864 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH17Q12864 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH17Q12864 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.78■□□□□ 0.44
CDH17Q12864 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH17Q12864 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH17Q12864 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDH17Q12864 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDH17Q12864 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.78■□□□□ 0.44
CDH17Q12864 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CDH17Q12864 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH17Q12864 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH17Q12864 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH17Q12864 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH17Q12864 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH17Q12864 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.77■□□□□ 0.44
CDH17Q12864 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDH17Q12864 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH17Q12864 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH17Q12864 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH17Q12864 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH17Q12864 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDH17Q12864 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms