Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS1Q01581 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS1Q01581 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 AC083849.1-201ENST00000615227 514 ntBASIC16.99■□□□□ 0.31
HMGCS1Q01581 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.99■□□□□ 0.31
HMGCS1Q01581 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS1Q01581 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS1Q01581 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS1Q01581 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS1Q01581 LYSMD4-203ENST00000378904 2122 ntBASIC16.99■□□□□ 0.31
HMGCS1Q01581 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.99■□□□□ 0.31
HMGCS1Q01581 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HMGCS1Q01581 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS1Q01581 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.98■□□□□ 0.31
HMGCS1Q01581 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS1Q01581 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS1Q01581 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.98■□□□□ 0.31
HMGCS1Q01581 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.98■□□□□ 0.31
HMGCS1Q01581 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS1Q01581 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS1Q01581 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS1Q01581 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS1Q01581 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS1Q01581 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS1Q01581 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.98■□□□□ 0.31
HMGCS1Q01581 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.98■□□□□ 0.31
HMGCS1Q01581 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS1Q01581 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.98■□□□□ 0.31
HMGCS1Q01581 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.98■□□□□ 0.31
HMGCS1Q01581 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS1Q01581 AC063952.2-201ENST00000498792 1227 ntBASIC16.98■□□□□ 0.31
HMGCS1Q01581 AL049597.2-201ENST00000565575 961 ntBASIC16.98■□□□□ 0.31
HMGCS1Q01581 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.98■□□□□ 0.31
HMGCS1Q01581 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.98■□□□□ 0.31
HMGCS1Q01581 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.98■□□□□ 0.31
HMGCS1Q01581 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS1Q01581 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
HMGCS1Q01581 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS1Q01581 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.98■□□□□ 0.31
HMGCS1Q01581 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
HMGCS1Q01581 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS1Q01581 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
HMGCS1Q01581 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.98■□□□□ 0.31
HMGCS1Q01581 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.98■□□□□ 0.31
HMGCS1Q01581 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.98■□□□□ 0.31
HMGCS1Q01581 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS1Q01581 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCS1Q01581 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.98■□□□□ 0.31
HMGCS1Q01581 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.98■□□□□ 0.31
HMGCS1Q01581 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.98■□□□□ 0.31
HMGCS1Q01581 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS1Q01581 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS1Q01581 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS1Q01581 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS1Q01581 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS1Q01581 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
HMGCS1Q01581 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS1Q01581 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
HMGCS1Q01581 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS1Q01581 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.97■□□□□ 0.31
HMGCS1Q01581 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS1Q01581 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS1Q01581 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS1Q01581 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.97■□□□□ 0.31
HMGCS1Q01581 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS1Q01581 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.97■□□□□ 0.31
HMGCS1Q01581 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.97■□□□□ 0.31
HMGCS1Q01581 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS1Q01581 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS1Q01581 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.97■□□□□ 0.31
HMGCS1Q01581 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.97■□□□□ 0.31
HMGCS1Q01581 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.97■□□□□ 0.31
HMGCS1Q01581 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS1Q01581 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS1Q01581 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS1Q01581 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS1Q01581 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS1Q01581 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
HMGCS1Q01581 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS1Q01581 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
HMGCS1Q01581 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS1Q01581 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.97■□□□□ 0.31
HMGCS1Q01581 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS1Q01581 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCS1Q01581 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGCS1Q01581 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGCS1Q01581 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.96■□□□□ 0.31
HMGCS1Q01581 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms