Protein–RNA interactions for Protein: P61221

ABCE1, ATP-binding cassette sub-family E member 1, humanhuman

Known RBP Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCE1P61221 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.36■□□□□ 0.37
ABCE1P61221 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.36■□□□□ 0.37
ABCE1P61221 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ABCE1P61221 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCE1P61221 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ABCE1P61221 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ABCE1P61221 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCE1P61221 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.35■□□□□ 0.37
ABCE1P61221 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ABCE1P61221 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCE1P61221 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCE1P61221 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ABCE1P61221 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ABCE1P61221 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCE1P61221 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.35■□□□□ 0.37
ABCE1P61221 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.35■□□□□ 0.37
ABCE1P61221 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.35■□□□□ 0.37
ABCE1P61221 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.35■□□□□ 0.37
ABCE1P61221 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ABCE1P61221 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.35■□□□□ 0.37
ABCE1P61221 AL157888.1-201ENST00000631930 593 ntBASIC17.35■□□□□ 0.37
ABCE1P61221 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.35■□□□□ 0.37
ABCE1P61221 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.35■□□□□ 0.37
ABCE1P61221 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.35■□□□□ 0.37
ABCE1P61221 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCE1P61221 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCE1P61221 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCE1P61221 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCE1P61221 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ABCE1P61221 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ABCE1P61221 PCDHB19P-201ENST00000570871 2371 ntBASIC17.35■□□□□ 0.37
ABCE1P61221 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ABCE1P61221 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ABCE1P61221 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
ABCE1P61221 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ABCE1P61221 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ABCE1P61221 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ABCE1P61221 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ABCE1P61221 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ABCE1P61221 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ABCE1P61221 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ABCE1P61221 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ABCE1P61221 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ABCE1P61221 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ABCE1P61221 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ABCE1P61221 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ABCE1P61221 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.34■□□□□ 0.37
ABCE1P61221 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.34■□□□□ 0.37
ABCE1P61221 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.34■□□□□ 0.37
ABCE1P61221 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ABCE1P61221 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
ABCE1P61221 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
ABCE1P61221 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.34■□□□□ 0.37
ABCE1P61221 EGLN1P1-201ENST00000531623 762 ntBASIC17.34■□□□□ 0.37
ABCE1P61221 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
ABCE1P61221 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.34■□□□□ 0.37
ABCE1P61221 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.34■□□□□ 0.37
ABCE1P61221 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.34■□□□□ 0.37
ABCE1P61221 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ABCE1P61221 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ABCE1P61221 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ABCE1P61221 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ABCE1P61221 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ABCE1P61221 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ABCE1P61221 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ABCE1P61221 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ABCE1P61221 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ABCE1P61221 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ABCE1P61221 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.33■□□□□ 0.37
ABCE1P61221 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.33■□□□□ 0.37
ABCE1P61221 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ABCE1P61221 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.33■□□□□ 0.37
ABCE1P61221 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ABCE1P61221 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ABCE1P61221 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ABCE1P61221 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.33■□□□□ 0.37
ABCE1P61221 AC116353.5-201ENST00000638148 1699 ntBASIC17.33■□□□□ 0.37
ABCE1P61221 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ABCE1P61221 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
ABCE1P61221 BX276092.7-203ENST00000637198 1536 ntBASIC17.33■□□□□ 0.37
ABCE1P61221 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ABCE1P61221 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ABCE1P61221 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ABCE1P61221 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.33■□□□□ 0.36
ABCE1P61221 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.33■□□□□ 0.36
ABCE1P61221 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
ABCE1P61221 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ABCE1P61221 AC005104.2-201ENST00000427818 678 ntBASIC17.33■□□□□ 0.36
ABCE1P61221 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
ABCE1P61221 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.33■□□□□ 0.36
ABCE1P61221 NEK4P2-201ENST00000580004 1012 ntBASIC17.33■□□□□ 0.36
ABCE1P61221 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.33■□□□□ 0.36
ABCE1P61221 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ABCE1P61221 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ABCE1P61221 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ABCE1P61221 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ABCE1P61221 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ABCE1P61221 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.33■□□□□ 0.36
ABCE1P61221 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ABCE1P61221 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms