Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC12.59□□□□□ -0.39
UBE2D3P61077 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.59□□□□□ -0.39
UBE2D3P61077 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
UBE2D3P61077 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
UBE2D3P61077 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.39
UBE2D3P61077 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
UBE2D3P61077 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D3P61077 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
UBE2D3P61077 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.58□□□□□ -0.4
UBE2D3P61077 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D3P61077 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D3P61077 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D3P61077 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
UBE2D3P61077 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D3P61077 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
UBE2D3P61077 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D3P61077 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D3P61077 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D3P61077 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D3P61077 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D3P61077 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC12.58□□□□□ -0.4
UBE2D3P61077 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D3P61077 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC12.58□□□□□ -0.4
UBE2D3P61077 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.58□□□□□ -0.4
UBE2D3P61077 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D3P61077 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D3P61077 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D3P61077 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC12.58□□□□□ -0.4
UBE2D3P61077 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC12.58□□□□□ -0.4
UBE2D3P61077 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC12.58□□□□□ -0.4
UBE2D3P61077 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D3P61077 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC12.58□□□□□ -0.4
UBE2D3P61077 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC12.58□□□□□ -0.4
UBE2D3P61077 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC12.58□□□□□ -0.4
UBE2D3P61077 DET1-205ENST00000558413 583 ntTSL 4 BASIC12.58□□□□□ -0.4
UBE2D3P61077 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.58□□□□□ -0.4
UBE2D3P61077 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D3P61077 USF2-205ENST00000594064 1179 ntTSL 2 BASIC12.58□□□□□ -0.4
UBE2D3P61077 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.58□□□□□ -0.4
UBE2D3P61077 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
UBE2D3P61077 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC12.58□□□□□ -0.4
UBE2D3P61077 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D3P61077 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
UBE2D3P61077 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
UBE2D3P61077 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D3P61077 ABR-203ENST00000536794 2213 ntTSL 2 BASIC12.58□□□□□ -0.4
UBE2D3P61077 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.58□□□□□ -0.4
UBE2D3P61077 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
UBE2D3P61077 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC12.58□□□□□ -0.4
UBE2D3P61077 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
UBE2D3P61077 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.58□□□□□ -0.4
UBE2D3P61077 KRT89P-201ENST00000620027 1478 ntBASIC12.58□□□□□ -0.4
UBE2D3P61077 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
UBE2D3P61077 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
UBE2D3P61077 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC12.58□□□□□ -0.4
UBE2D3P61077 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC12.58□□□□□ -0.4
UBE2D3P61077 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC12.58□□□□□ -0.4
UBE2D3P61077 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC12.58□□□□□ -0.4
UBE2D3P61077 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
UBE2D3P61077 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2D3P61077 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2D3P61077 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2D3P61077 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2D3P61077 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2D3P61077 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.57□□□□□ -0.4
UBE2D3P61077 DOC2GP-204ENST00000639052 2548 ntBASIC12.57□□□□□ -0.4
UBE2D3P61077 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC12.57□□□□□ -0.4
UBE2D3P61077 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2D3P61077 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2D3P61077 PCDHA1-201ENST00000378133 2726 ntBASIC12.57□□□□□ -0.4
UBE2D3P61077 AL138688.1-201ENST00000624851 1594 ntBASIC12.57□□□□□ -0.4
UBE2D3P61077 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2D3P61077 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2D3P61077 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
UBE2D3P61077 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC12.57□□□□□ -0.4
UBE2D3P61077 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC12.57□□□□□ -0.4
UBE2D3P61077 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2D3P61077 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2D3P61077 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2D3P61077 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC12.57□□□□□ -0.4
UBE2D3P61077 CD81-212ENST00000526072 1172 ntTSL 5 BASIC12.57□□□□□ -0.4
UBE2D3P61077 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC12.57□□□□□ -0.4
UBE2D3P61077 GCSHP2-201ENST00000560971 527 ntBASIC12.57□□□□□ -0.4
UBE2D3P61077 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.57□□□□□ -0.4
UBE2D3P61077 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC12.57□□□□□ -0.4
UBE2D3P61077 AC024563.2-201ENST00000603282 481 ntBASIC12.57□□□□□ -0.4
UBE2D3P61077 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2D3P61077 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2D3P61077 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2D3P61077 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC12.57□□□□□ -0.4
UBE2D3P61077 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2D3P61077 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2D3P61077 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2D3P61077 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2D3P61077 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
UBE2D3P61077 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
UBE2D3P61077 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC12.56□□□□□ -0.4
UBE2D3P61077 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC12.56□□□□□ -0.4
UBE2D3P61077 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC12.56□□□□□ -0.4
UBE2D3P61077 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms