Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN20P56880 AC074051.2-201ENST00000565115 352 ntBASIC16.17■□□□□ 0.18
CLDN20P56880 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN20P56880 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.17■□□□□ 0.18
CLDN20P56880 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.17■□□□□ 0.18
CLDN20P56880 AL353801.3-201ENST00000609898 542 ntBASIC16.17■□□□□ 0.18
CLDN20P56880 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.17■□□□□ 0.18
CLDN20P56880 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN20P56880 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.17■□□□□ 0.18
CLDN20P56880 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN20P56880 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN20P56880 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN20P56880 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN20P56880 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN20P56880 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN20P56880 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN20P56880 AL118508.1-201ENST00000613502 2345 ntBASIC16.17■□□□□ 0.18
CLDN20P56880 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN20P56880 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN20P56880 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN20P56880 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLDN20P56880 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CLDN20P56880 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN20P56880 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN20P56880 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN20P56880 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CLDN20P56880 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CLDN20P56880 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN20P56880 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN20P56880 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CLDN20P56880 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CLDN20P56880 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
CLDN20P56880 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN20P56880 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN20P56880 DUSP5P1-201ENST00000441325 1139 ntBASIC16.16■□□□□ 0.18
CLDN20P56880 VENTXP7-201ENST00000475503 772 ntBASIC16.16■□□□□ 0.18
CLDN20P56880 AC104819.1-201ENST00000504587 486 ntBASIC16.16■□□□□ 0.18
CLDN20P56880 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.16■□□□□ 0.18
CLDN20P56880 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.16■□□□□ 0.18
CLDN20P56880 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.16■□□□□ 0.18
CLDN20P56880 AC012615.1-201ENST00000565797 1299 ntBASIC16.16■□□□□ 0.18
CLDN20P56880 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.16■□□□□ 0.18
CLDN20P56880 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN20P56880 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN20P56880 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.16■□□□□ 0.18
CLDN20P56880 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLDN20P56880 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.16■□□□□ 0.18
CLDN20P56880 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN20P56880 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
CLDN20P56880 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN20P56880 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN20P56880 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN20P56880 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN20P56880 AC138028.4-201ENST00000564984 1845 ntBASIC16.15■□□□□ 0.18
CLDN20P56880 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN20P56880 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN20P56880 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN20P56880 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN20P56880 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN20P56880 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN20P56880 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN20P56880 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN20P56880 AC246785.2-201ENST00000432512 513 ntBASIC16.15■□□□□ 0.18
CLDN20P56880 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN20P56880 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN20P56880 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.15■□□□□ 0.18
CLDN20P56880 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN20P56880 PRELID1P1-202ENST00000567272 903 ntBASIC16.15■□□□□ 0.18
CLDN20P56880 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.15■□□□□ 0.18
CLDN20P56880 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLDN20P56880 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms