Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.28■■□□□ 1.16
KCNQ4P56696 BASP1P1-201ENST00000430708 665 ntBASIC22.28■■□□□ 1.16
KCNQ4P56696 AC079140.1-201ENST00000508039 487 ntBASIC22.28■■□□□ 1.16
KCNQ4P56696 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KCNQ4P56696 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC22.28■■□□□ 1.16
KCNQ4P56696 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
KCNQ4P56696 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.28■■□□□ 1.16
KCNQ4P56696 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC22.28■■□□□ 1.16
KCNQ4P56696 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KCNQ4P56696 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC22.28■■□□□ 1.16
KCNQ4P56696 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
KCNQ4P56696 TUBB3P1-201ENST00000405796 1332 ntBASIC22.28■■□□□ 1.16
KCNQ4P56696 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KCNQ4P56696 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KCNQ4P56696 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
KCNQ4P56696 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ4P56696 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC22.27■■□□□ 1.16
KCNQ4P56696 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ4P56696 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC22.27■■□□□ 1.16
KCNQ4P56696 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC22.27■■□□□ 1.16
KCNQ4P56696 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC22.27■■□□□ 1.16
KCNQ4P56696 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ4P56696 GPS2P2-201ENST00000430745 888 ntBASIC22.27■■□□□ 1.16
KCNQ4P56696 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC22.27■■□□□ 1.16
KCNQ4P56696 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ4P56696 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC22.27■■□□□ 1.16
KCNQ4P56696 RPL28-209ENST00000560055 670 ntTSL 3 BASIC22.27■■□□□ 1.16
KCNQ4P56696 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC22.27■■□□□ 1.16
KCNQ4P56696 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ4P56696 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ4P56696 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ4P56696 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ4P56696 EFTUD1P1-204ENST00000560401 1798 ntBASIC22.27■■□□□ 1.16
KCNQ4P56696 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ4P56696 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ4P56696 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
KCNQ4P56696 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KCNQ4P56696 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KCNQ4P56696 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC22.26■■□□□ 1.15
KCNQ4P56696 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
KCNQ4P56696 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
KCNQ4P56696 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
KCNQ4P56696 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC22.26■■□□□ 1.15
KCNQ4P56696 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22.26■■□□□ 1.15
KCNQ4P56696 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC22.26■■□□□ 1.15
KCNQ4P56696 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.26■■□□□ 1.15
KCNQ4P56696 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
KCNQ4P56696 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
KCNQ4P56696 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
KCNQ4P56696 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC22.26■■□□□ 1.15
KCNQ4P56696 HNRNPA1P40-201ENST00000426371 1278 ntBASIC22.26■■□□□ 1.15
KCNQ4P56696 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
KCNQ4P56696 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC22.26■■□□□ 1.15
KCNQ4P56696 GAPDHP21-201ENST00000450301 1010 ntBASIC22.26■■□□□ 1.15
KCNQ4P56696 SPDYE11-202ENST00000450699 704 ntBASIC22.26■■□□□ 1.15
KCNQ4P56696 SLC25A6P2-201ENST00000497974 877 ntBASIC22.26■■□□□ 1.15
KCNQ4P56696 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC22.26■■□□□ 1.15
KCNQ4P56696 IGHV3-52-201ENST00000519770 353 ntBASIC22.26■■□□□ 1.15
KCNQ4P56696 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
KCNQ4P56696 AC243562.1-201ENST00000560672 389 ntBASIC22.26■■□□□ 1.15
KCNQ4P56696 SPDYE9P-201ENST00000570642 692 ntBASIC22.26■■□□□ 1.15
KCNQ4P56696 LINC02560-201ENST00000596379 459 ntBASIC22.26■■□□□ 1.15
KCNQ4P56696 SPDYE10P-202ENST00000612005 668 ntBASIC22.26■■□□□ 1.15
KCNQ4P56696 SPDYE8P-202ENST00000612377 668 ntBASIC22.26■■□□□ 1.15
KCNQ4P56696 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
KCNQ4P56696 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KCNQ4P56696 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
KCNQ4P56696 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
KCNQ4P56696 CYP51A1P2-201ENST00000419457 1499 ntBASIC22.26■■□□□ 1.15
KCNQ4P56696 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC22.26■■□□□ 1.15
KCNQ4P56696 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.26■■□□□ 1.15
KCNQ4P56696 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
KCNQ4P56696 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
KCNQ4P56696 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
KCNQ4P56696 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC22.26■■□□□ 1.15
KCNQ4P56696 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
KCNQ4P56696 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
KCNQ4P56696 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
KCNQ4P56696 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
KCNQ4P56696 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
KCNQ4P56696 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
KCNQ4P56696 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
KCNQ4P56696 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
KCNQ4P56696 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
KCNQ4P56696 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC22.25■■□□□ 1.15
KCNQ4P56696 TREML5P-201ENST00000421694 576 ntBASIC22.25■■□□□ 1.15
KCNQ4P56696 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
KCNQ4P56696 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC22.25■■□□□ 1.15
KCNQ4P56696 CNN2P2-201ENST00000443536 909 ntBASIC22.25■■□□□ 1.15
KCNQ4P56696 CNN2P3-201ENST00000450201 906 ntBASIC22.25■■□□□ 1.15
KCNQ4P56696 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC22.25■■□□□ 1.15
KCNQ4P56696 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC22.25■■□□□ 1.15
KCNQ4P56696 AC069335.1-201ENST00000489972 472 ntBASIC22.25■■□□□ 1.15
KCNQ4P56696 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC22.25■■□□□ 1.15
KCNQ4P56696 AL136317.3-201ENST00000618497 906 ntBASIC22.25■■□□□ 1.15
KCNQ4P56696 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC22.25■■□□□ 1.15
KCNQ4P56696 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC22.25■■□□□ 1.15
KCNQ4P56696 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
KCNQ4P56696 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
KCNQ4P56696 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms