Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.68■□□□□ 0.74
LBX1P52954 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
LBX1P52954 CHCHD2P3-201ENST00000603038 451 ntBASIC19.68■□□□□ 0.74
LBX1P52954 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
LBX1P52954 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LBX1P52954 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
LBX1P52954 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LBX1P52954 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LBX1P52954 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.68■□□□□ 0.74
LBX1P52954 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LBX1P52954 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LBX1P52954 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.68■□□□□ 0.74
LBX1P52954 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LBX1P52954 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
LBX1P52954 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LBX1P52954 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC19.67■□□□□ 0.74
LBX1P52954 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LBX1P52954 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LBX1P52954 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.67■□□□□ 0.74
LBX1P52954 GABARAPL3-202ENST00000624044 1851 ntBASIC19.67■□□□□ 0.74
LBX1P52954 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LBX1P52954 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.67■□□□□ 0.74
LBX1P52954 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LBX1P52954 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LBX1P52954 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LBX1P52954 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LBX1P52954 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LBX1P52954 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.67■□□□□ 0.74
LBX1P52954 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.67■□□□□ 0.74
LBX1P52954 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.67■□□□□ 0.74
LBX1P52954 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.67■□□□□ 0.74
LBX1P52954 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.67■□□□□ 0.74
LBX1P52954 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC19.67■□□□□ 0.74
LBX1P52954 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LBX1P52954 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.67■□□□□ 0.74
LBX1P52954 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LBX1P52954 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.67■□□□□ 0.74
LBX1P52954 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LBX1P52954 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.67■□□□□ 0.74
LBX1P52954 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LBX1P52954 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
LBX1P52954 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LBX1P52954 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.67■□□□□ 0.74
LBX1P52954 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LBX1P52954 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LBX1P52954 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.67■□□□□ 0.74
LBX1P52954 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC19.67■□□□□ 0.74
LBX1P52954 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LBX1P52954 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LBX1P52954 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
LBX1P52954 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LBX1P52954 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LBX1P52954 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
LBX1P52954 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC19.66■□□□□ 0.74
LBX1P52954 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LBX1P52954 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LBX1P52954 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LBX1P52954 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LBX1P52954 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LBX1P52954 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
LBX1P52954 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.66■□□□□ 0.74
LBX1P52954 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.66■□□□□ 0.74
LBX1P52954 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LBX1P52954 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.66■□□□□ 0.74
LBX1P52954 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC19.66■□□□□ 0.74
LBX1P52954 GOLGA2P4-201ENST00000441462 777 ntBASIC19.66■□□□□ 0.74
LBX1P52954 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.66■□□□□ 0.74
LBX1P52954 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LBX1P52954 RHOQP1-201ENST00000555758 579 ntBASIC19.66■□□□□ 0.74
LBX1P52954 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC19.66■□□□□ 0.74
LBX1P52954 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC19.66■□□□□ 0.74
LBX1P52954 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LBX1P52954 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.66■□□□□ 0.74
LBX1P52954 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LBX1P52954 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LBX1P52954 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.66■□□□□ 0.74
LBX1P52954 AL391825.1-201ENST00000457671 1364 ntBASIC19.66■□□□□ 0.74
LBX1P52954 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LBX1P52954 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.66■□□□□ 0.74
LBX1P52954 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LBX1P52954 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LBX1P52954 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LBX1P52954 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
LBX1P52954 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LBX1P52954 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.65■□□□□ 0.74
LBX1P52954 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LBX1P52954 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.65■□□□□ 0.74
LBX1P52954 AC012676.1-201ENST00000574705 1949 ntBASIC19.65■□□□□ 0.74
LBX1P52954 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LBX1P52954 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC19.65■□□□□ 0.74
LBX1P52954 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LBX1P52954 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.65■□□□□ 0.74
LBX1P52954 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
LBX1P52954 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LBX1P52954 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC19.65■□□□□ 0.74
LBX1P52954 AC004840.1-201ENST00000636359 365 ntBASIC19.65■□□□□ 0.74
LBX1P52954 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.65■□□□□ 0.74
LBX1P52954 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.65■□□□□ 0.74
LBX1P52954 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.65■□□□□ 0.74
LBX1P52954 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms