Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP11P51784 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP11P51784 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP11P51784 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP11P51784 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.88■□□□□ 0.77
USP11P51784 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.88■□□□□ 0.77
USP11P51784 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
USP11P51784 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP11P51784 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.88■□□□□ 0.77
USP11P51784 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
USP11P51784 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
USP11P51784 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
USP11P51784 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USP11P51784 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
USP11P51784 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP11P51784 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.88■□□□□ 0.77
USP11P51784 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
USP11P51784 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
USP11P51784 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.87■□□□□ 0.77
USP11P51784 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP11P51784 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
USP11P51784 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP11P51784 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP11P51784 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.87■□□□□ 0.77
USP11P51784 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.87■□□□□ 0.77
USP11P51784 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.87■□□□□ 0.77
USP11P51784 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP11P51784 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP11P51784 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP11P51784 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.87■□□□□ 0.77
USP11P51784 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USP11P51784 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.87■□□□□ 0.77
USP11P51784 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
USP11P51784 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP11P51784 SART3-203ENST00000546611 1184 ntBASIC19.87■□□□□ 0.77
USP11P51784 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
USP11P51784 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
USP11P51784 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP11P51784 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP11P51784 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP11P51784 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.87■□□□□ 0.77
USP11P51784 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.87■□□□□ 0.77
USP11P51784 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP11P51784 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP11P51784 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.87■□□□□ 0.77
USP11P51784 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP11P51784 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USP11P51784 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.86■□□□□ 0.77
USP11P51784 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP11P51784 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP11P51784 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP11P51784 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP11P51784 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP11P51784 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP11P51784 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP11P51784 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.86■□□□□ 0.77
USP11P51784 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
USP11P51784 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
USP11P51784 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
USP11P51784 SIGLEC30P-201ENST00000455569 941 ntBASIC19.86■□□□□ 0.77
USP11P51784 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.86■□□□□ 0.77
USP11P51784 AL121894.2-201ENST00000602977 491 ntBASIC19.86■□□□□ 0.77
USP11P51784 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.86■□□□□ 0.77
USP11P51784 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP11P51784 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP11P51784 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP11P51784 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP11P51784 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
USP11P51784 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP11P51784 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USP11P51784 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USP11P51784 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.86■□□□□ 0.77
USP11P51784 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.85■□□□□ 0.77
USP11P51784 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
USP11P51784 LYSMD4-203ENST00000378904 2122 ntBASIC19.85■□□□□ 0.77
USP11P51784 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP11P51784 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.85■□□□□ 0.77
USP11P51784 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
USP11P51784 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP11P51784 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP11P51784 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.85■□□□□ 0.77
USP11P51784 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.85■□□□□ 0.77
USP11P51784 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
USP11P51784 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP11P51784 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP11P51784 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP11P51784 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.85■□□□□ 0.77
USP11P51784 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP11P51784 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
USP11P51784 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
USP11P51784 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.85■□□□□ 0.77
USP11P51784 FAM197Y8-203ENST00000450145 560 ntBASIC19.85■□□□□ 0.77
USP11P51784 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.85■□□□□ 0.77
USP11P51784 AP002469.2-201ENST00000531724 424 ntBASIC19.85■□□□□ 0.77
USP11P51784 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.85■□□□□ 0.77
USP11P51784 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.85■□□□□ 0.77
USP11P51784 TP73-AS1-207ENST00000624167 988 ntBASIC19.85■□□□□ 0.77
USP11P51784 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
USP11P51784 AL022326.1-202ENST00000641533 845 ntBASIC19.85■□□□□ 0.77
USP11P51784 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms