Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.21■□□□□ 0.03
CBX5P45973 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX5P45973 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15.21■□□□□ 0.03
CBX5P45973 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX5P45973 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX5P45973 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CBX5P45973 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX5P45973 MFAP1P1-201ENST00000442257 1255 ntBASIC15.21■□□□□ 0.03
CBX5P45973 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.21■□□□□ 0.03
CBX5P45973 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.21■□□□□ 0.03
CBX5P45973 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.21■□□□□ 0.03
CBX5P45973 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CBX5P45973 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CBX5P45973 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.21■□□□□ 0.03
CBX5P45973 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX5P45973 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX5P45973 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CBX5P45973 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CBX5P45973 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CBX5P45973 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.21■□□□□ 0.02
CBX5P45973 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CBX5P45973 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CBX5P45973 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CBX5P45973 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.21■□□□□ 0.02
CBX5P45973 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.02
CBX5P45973 NKILA-202ENST00000614771 2598 ntBASIC15.21■□□□□ 0.02
CBX5P45973 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CBX5P45973 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CBX5P45973 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX5P45973 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX5P45973 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.2■□□□□ 0.02
CBX5P45973 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CBX5P45973 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX5P45973 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.2■□□□□ 0.02
CBX5P45973 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX5P45973 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.2■□□□□ 0.02
CBX5P45973 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CBX5P45973 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CBX5P45973 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.2■□□□□ 0.02
CBX5P45973 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CBX5P45973 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX5P45973 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.2■□□□□ 0.02
CBX5P45973 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CBX5P45973 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CBX5P45973 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX5P45973 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CBX5P45973 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX5P45973 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.2■□□□□ 0.02
CBX5P45973 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX5P45973 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.2■□□□□ 0.02
CBX5P45973 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.2■□□□□ 0.02
CBX5P45973 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.2■□□□□ 0.02
CBX5P45973 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.2■□□□□ 0.02
CBX5P45973 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.2■□□□□ 0.02
CBX5P45973 AC008687.5-201ENST00000593746 558 ntBASIC15.2■□□□□ 0.02
CBX5P45973 AC116407.2-201ENST00000613639 860 ntBASIC15.2■□□□□ 0.02
CBX5P45973 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX5P45973 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX5P45973 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX5P45973 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CBX5P45973 HLA-J-201ENST00000462773 1622 ntBASIC15.2■□□□□ 0.02
CBX5P45973 AL024508.2-201ENST00000607749 1894 ntBASIC15.2■□□□□ 0.02
CBX5P45973 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX5P45973 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX5P45973 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.2■□□□□ 0.02
CBX5P45973 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.2■□□□□ 0.02
CBX5P45973 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CBX5P45973 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.2■□□□□ 0.02
CBX5P45973 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CBX5P45973 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.2■□□□□ 0.02
CBX5P45973 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CBX5P45973 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CBX5P45973 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CBX5P45973 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.19■□□□□ 0.02
CBX5P45973 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
CBX5P45973 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CBX5P45973 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.19■□□□□ 0.02
CBX5P45973 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.19■□□□□ 0.02
CBX5P45973 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CBX5P45973 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CBX5P45973 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CBX5P45973 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CBX5P45973 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.19■□□□□ 0.02
CBX5P45973 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CBX5P45973 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CBX5P45973 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CBX5P45973 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.19■□□□□ 0.02
CBX5P45973 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CBX5P45973 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CBX5P45973 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CBX5P45973 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CBX5P45973 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CBX5P45973 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.19■□□□□ 0.02
CBX5P45973 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC15.19■□□□□ 0.02
CBX5P45973 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CBX5P45973 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CBX5P45973 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CBX5P45973 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CBX5P45973 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.19■□□□□ 0.02
CBX5P45973 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms