Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 C9orf3-206ENST00000428313 2288 ntTSL 1 (best)17.83■□□□□ 0.454e-6■■□□□ 13.2
MATR3P43243 C9orf3-204ENST00000424143 1605 ntTSL 216.74■□□□□ 0.274e-6■■□□□ 13.2
MATR3P43243 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.44■□□□□ 0.064e-6■■□□□ 13.2
MATR3P43243 C9orf3-203ENST00000375315 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.274e-6■■□□□ 13.2
MATR3P43243 CCDC144NL-AS1-212ENST00000580056 521 ntTSL 417.06■□□□□ 0.322e-6■■□□□ 13.2
MATR3P43243 CCDC144NL-AS1-216ENST00000582583 1670 ntTSL 1 (best) BASIC13.51□□□□□ -0.252e-6■■□□□ 13.2
MATR3P43243 CCDC144NL-AS1-202ENST00000423473 839 ntTSL 5 BASIC9.94□□□□□ -0.822e-6■■□□□ 13.2
MATR3P43243 CCDC144NL-AS1-217ENST00000583481 710 ntTSL 39.52□□□□□ -0.892e-6■■□□□ 13.2
MATR3P43243 RALGPS2-209ENST00000495034 1970 ntTSL 218.7■□□□□ 0.584e-6■■□□□ 13.1
MATR3P43243 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.374e-6■■□□□ 13.1
MATR3P43243 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC14.7□□□□□ -0.064e-6■■□□□ 13.1
MATR3P43243 RALGPS2-201ENST00000324778 906 ntTSL 55.47□□□□□ -1.534e-6■■□□□ 13.1
MATR3P43243 SCARB1-206ENST00000539320 720 ntTSL 224.26■■□□□ 1.472e-7■■□□□ 13.1
MATR3P43243 CR1L-204ENST00000530905 930 ntTSL 523.18■■□□□ 1.31e-6■■□□□ 13.1
MATR3P43243 SCARB1-210ENST00000545493 581 ntTSL 223.04■■□□□ 1.282e-7■■□□□ 13.1
MATR3P43243 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.03■□□□□ 0.481e-6■■□□□ 13.1
MATR3P43243 SCARB1-207ENST00000541661 476 ntTSL 514.21□□□□□ -0.132e-7■■□□□ 13.1
MATR3P43243 CR1L-203ENST00000508064 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.521e-6■■□□□ 13.1
MATR3P43243 DCUN1D4-221ENST00000512199 577 ntTSL 410.56□□□□□ -0.721e-6■■□□□ 13.1
MATR3P43243 CDC42BPA-208ENST00000442054 3786 ntTSL 1 (best)8.25□□□□□ -1.091e-6■■□□□ 13.1
MATR3P43243 CR1L-201ENST00000294997 1587 ntTSL 1 (best)7.91□□□□□ -1.141e-6■■□□□ 13.1
MATR3P43243 CDC42BPA-209ENST00000448940 7355 ntTSL 1 (best)6.78□□□□□ -1.321e-6■■□□□ 13.1
MATR3P43243 AC090114.3-201ENST00000479267 829 ntBASIC5.62□□□□□ -1.511e-6■■□□□ 13.1
MATR3P43243 ZCCHC7-204ENST00000463625 732 ntTSL 24.94□□□□□ -1.621e-6■■□□□ 13.1
MATR3P43243 ZCCHC7-205ENST00000481507 903 ntTSL 24.93□□□□□ -1.621e-6■■□□□ 13.1
MATR3P43243 ZCCHC7-208ENST00000497924 699 ntTSL 24.71□□□□□ -1.661e-6■■□□□ 13.1
MATR3P43243 ZCCHC7-207ENST00000496099 721 ntTSL 34.37□□□□□ -1.711e-6■■□□□ 13.1
MATR3P43243 CDC42BPA-207ENST00000441725 2183 ntTSL 54.14□□□□□ -1.751e-6■■□□□ 13.1
MATR3P43243 TOPBP1-207ENST00000509162 811 ntTSL 27.81□□□□□ -1.162e-6■■□□□ 13.1
MATR3P43243 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.52e-6■■□□□ 13.1
MATR3P43243 TOPBP1-208ENST00000511439 1142 ntTSL 53.26□□□□□ -1.892e-6■■□□□ 13.1
MATR3P43243 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.623e-6■■□□□ 13.1
MATR3P43243 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.552e-6■■□□□ 13.1
MATR3P43243 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.12e-6■■□□□ 13.1
MATR3P43243 INTS13-209ENST00000544548 875 ntTSL 313.42□□□□□ -0.262e-6■■□□□ 13.1
MATR3P43243 INTS13-203ENST00000537336 560 ntTSL 312.9□□□□□ -0.342e-6■■□□□ 13.1
MATR3P43243 KLHL24-205ENST00000454652 7380 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.423e-6■■□□□ 13.1
MATR3P43243 INTS13-206ENST00000538727 552 ntTSL 410.26□□□□□ -0.772e-6■■□□□ 13.1
MATR3P43243 ARHGAP19-201ENST00000358308 5390 ntTSL 1 (best) BASIC11.76□□□□□ -0.534e-6■■□□□ 13.1
MATR3P43243 ARHGAP19-SLIT1-202ENST00000479633 1876 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.544e-6■■□□□ 13.1
MATR3P43243 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.694e-6■■□□□ 13.1
MATR3P43243 ARHGAP19-203ENST00000371027 2301 ntTSL 2 BASIC10.3□□□□□ -0.764e-6■■□□□ 13.1
MATR3P43243 ARHGAP19-206ENST00000492211 5525 ntTSL 29.68□□□□□ -0.864e-6■■□□□ 13.1
MATR3P43243 ARHGAP19-205ENST00000487035 4553 ntTSL 27.91□□□□□ -1.144e-6■■□□□ 13.1
MATR3P43243 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC7.84□□□□□ -1.156e-8■■□□□ 13.1
MATR3P43243 PWAR6-201ENST00000552334 4618 ntBASIC3.85□□□□□ -1.796e-8■■□□□ 13.1
MATR3P43243 MPP1-206ENST00000417435 970 ntTSL 519.37■□□□□ 0.697e-8■■□□□ 13.1
MATR3P43243 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.537e-8■■□□□ 13.1
MATR3P43243 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.82■□□□□ 0.447e-8■■□□□ 13.1
MATR3P43243 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.39■□□□□ 0.217e-8■■□□□ 13.1
MATR3P43243 MPP1-218ENST00000494170 969 ntTSL 316.23■□□□□ 0.197e-8■■□□□ 13.1
MATR3P43243 MPP1-211ENST00000471821 558 ntTSL 215.48■□□□□ 0.077e-8■■□□□ 13.1
MATR3P43243 MPP1-212ENST00000475943 860 ntTSL 1 (best)15.48■□□□□ 0.077e-8■■□□□ 13.1
MATR3P43243 MPP1-201ENST00000369531 519 ntTSL 313.97□□□□□ -0.177e-8■■□□□ 13.1
MATR3P43243 MPP1-207ENST00000428488 581 ntTSL 313.91□□□□□ -0.187e-8■■□□□ 13.1
MATR3P43243 MPP1-209ENST00000453245 729 ntTSL 513.91□□□□□ -0.187e-8■■□□□ 13.1
MATR3P43243 MPP1-208ENST00000439370 2066 ntTSL 513.61□□□□□ -0.237e-8■■□□□ 13.1
MATR3P43243 MPP1-203ENST00000393529 794 ntTSL 59.37□□□□□ -0.917e-8■■□□□ 13.1
MATR3P43243 TRIO-221ENST00000513206 7995 ntTSL 519.04■□□□□ 0.648e-7■■□□□ 13.1
MATR3P43243 TRIO-222ENST00000515144 7455 ntTSL 1 (best)17.26■□□□□ 0.358e-7■■□□□ 13.1
MATR3P43243 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.491e-6■■□□□ 13.1
MATR3P43243 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC15.92■□□□□ 0.141e-6■■□□□ 13.1
MATR3P43243 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.131e-6■■□□□ 13.1
MATR3P43243 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC15.34■□□□□ 0.051e-6■■□□□ 13.1
MATR3P43243 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.65e-10■■□□□ 13
MATR3P43243 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.045e-10■■□□□ 13
MATR3P43243 ARHGAP35-202ENST00000595822 2977 ntTSL 213.92□□□□□ -0.185e-10■■□□□ 13
MATR3P43243 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.34■■□□□ 1.339e-6■■□□□ 13
MATR3P43243 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.079e-6■■□□□ 13
MATR3P43243 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.019e-6■■□□□ 13
MATR3P43243 STAU2-208ENST00000520872 560 ntTSL 320.6■□□□□ 0.899e-6■■□□□ 13
MATR3P43243 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.89e-6■■□□□ 13
MATR3P43243 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.639e-6■■□□□ 13
MATR3P43243 ZFAND3-205ENST00000463847 969 ntTSL 1 (best)18.15■□□□□ 0.59e-6■■□□□ 13
MATR3P43243 TIMMDC1-205ENST00000486418 551 ntTSL 316.59■□□□□ 0.259e-6■■□□□ 13
MATR3P43243 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.119e-6■■□□□ 13
MATR3P43243 TIMMDC1-204ENST00000469324 634 ntTSL 314.49□□□□□ -0.099e-6■■□□□ 13
MATR3P43243 MED27-201ENST00000292035 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.139e-6■■□□□ 13
MATR3P43243 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC13.91□□□□□ -0.189e-6■■□□□ 13
MATR3P43243 TIMMDC1-201ENST00000264244 1271 ntTSL 1 (best)13.4□□□□□ -0.269e-6■■□□□ 13
MATR3P43243 TIMMDC1-206ENST00000492164 725 ntTSL 313.4□□□□□ -0.269e-6■■□□□ 13
MATR3P43243 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC13.4□□□□□ -0.269e-6■■□□□ 13
MATR3P43243 TIMMDC1-208ENST00000494664 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.379e-6■■□□□ 13
MATR3P43243 ARHGAP26-214ENST00000469131 667 ntTSL 312.59□□□□□ -0.399e-6■■□□□ 13
MATR3P43243 ARHGAP26-215ENST00000469396 513 ntTSL 512.59□□□□□ -0.399e-6■■□□□ 13
MATR3P43243 STAU2-228ENST00000524191 808 ntTSL 312.55□□□□□ -0.49e-6■■□□□ 13
MATR3P43243 TIMMDC1-203ENST00000466984 605 ntTSL 512.25□□□□□ -0.459e-6■■□□□ 13
MATR3P43243 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC12.04□□□□□ -0.489e-6■■□□□ 13
MATR3P43243 TIMMDC1-202ENST00000463927 670 ntTSL 510.88□□□□□ -0.679e-6■■□□□ 13
MATR3P43243 ARHGAP26-211ENST00000451259 527 ntTSL 510.86□□□□□ -0.679e-6■■□□□ 13
MATR3P43243 RPRD1B-204ENST00000471511 571 ntTSL 410.63□□□□□ -0.719e-6■■□□□ 13
MATR3P43243 ALMS1-208ENST00000620466 6720 ntTSL 29.75□□□□□ -0.859e-6■■□□□ 13
MATR3P43243 ZNF630-204ENST00000428463 1245 ntTSL 29.1□□□□□ -0.959e-6■■□□□ 13
MATR3P43243 ZNF182-201ENST00000376943 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -19e-6■■□□□ 13
MATR3P43243 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC8.64□□□□□ -1.039e-6■■□□□ 13
MATR3P43243 STAU2-226ENST00000524104 2173 ntTSL 1 (best) BASIC8.48□□□□□ -1.059e-6■■□□□ 13
MATR3P43243 ALMS1-201ENST00000423048 5194 ntTSL 1 (best)7.89□□□□□ -1.159e-6■■□□□ 13
MATR3P43243 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.199e-6■■□□□ 13
MATR3P43243 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.58□□□□□ -1.369e-6■■□□□ 13
MATR3P43243 STAU2-216ENST00000521736 550 ntTSL 56.58□□□□□ -1.369e-6■■□□□ 13
Retrieved 100 of 16,209 protein–RNA pairs in 76.5 ms