RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 AEBP2Q6ZN18 517 aaPredicted RBP15.69■□□□□ 0.1
CDC42BPA-207ENST00000441725 CHIC1Q5VXU3 224 aa15.19■□□□□ 0.02
CDC42BPA-207ENST00000441725 PHF23Q9BUL5 403 aaPredicted RBP13.34□□□□□ -0.27
CDC42BPA-207ENST00000441725 SENP3Q9H4L4 574 aaPredicted RBP13.34□□□□□ -0.27
CDC42BPA-207ENST00000441725 FOXD1Q16676 465 aa12.39□□□□□ -0.43
CDC42BPA-207ENST00000441725 PLPPR3Q6T4P5 718 aa12.27□□□□□ -0.45
CDC42BPA-207ENST00000441725 PPP6R1Q9UPN7 881 aa11.81□□□□□ -0.52
CDC42BPA-207ENST00000441725 ADRA2BP18089 450 aa11.78□□□□□ -0.52
CDC42BPA-207ENST00000441725 PIAS4Q8N2W9 510 aaPredicted RBP11.65□□□□□ -0.54
CDC42BPA-207ENST00000441725 MSH5O43196 834 aa11.49□□□□□ -0.57
CDC42BPA-207ENST00000441725 EHMT2Q96KQ7 1210 aa11.08□□□□□ -0.64
CDC42BPA-207ENST00000441725 KCNA4P22459 653 aa11.07□□□□□ -0.64
CDC42BPA-207ENST00000441725 PPP4R3CPQ6ZMV5 832 aa10.79□□□□□ -0.68
CDC42BPA-207ENST00000441725 SCAF1Q9H7N4 1312 aaKnown RBP10.79□□□□□ -0.68
CDC42BPA-207ENST00000441725 MAPK8IP2Q13387 824 aaPredicted RBP10.73□□□□□ -0.69
CDC42BPA-207ENST00000441725 POTEDQ86YR6 584 aa10.7□□□□□ -0.7
CDC42BPA-207ENST00000441725 CSRNP3Q8WYN3 585 aa10.65□□□□□ -0.7
CDC42BPA-207ENST00000441725 DMRT2Q9Y5R5 561 aa10.63□□□□□ -0.71
CDC42BPA-207ENST00000441725 SLC4A1APQ9BWU0 796 aaKnown RBP10.6□□□□□ -0.71
CDC42BPA-207ENST00000441725 CNKSR2Q8WXI2 1034 aa10.52□□□□□ -0.72
CDC42BPA-207ENST00000441725 NCBP3Q53F19 620 aaKnown RBP10.46□□□□□ -0.73
CDC42BPA-207ENST00000441725 RNF216Q9NWF9 866 aaPredicted RBP10.36□□□□□ -0.75
CDC42BPA-207ENST00000441725 HOXD11P31277 338 aaPredicted RBP10.35□□□□□ -0.75
CDC42BPA-207ENST00000441725 NPM3O75607 178 aaKnown RBP10.33□□□□□ -0.76
CDC42BPA-207ENST00000441725 ZBTB22O15209 634 aa10.22□□□□□ -0.77
CDC42BPA-207ENST00000441725 DCAF8L1A6NGE4 600 aa10.15□□□□□ -0.79
CDC42BPA-207ENST00000441725 DNAJC5BQ9UF47 199 aa10.07□□□□□ -0.8
CDC42BPA-207ENST00000441725 FOXD4L1Q9NU39 408 aa9.95□□□□□ -0.82
CDC42BPA-207ENST00000441725 SLC24A1O60721 1099 aa9.89□□□□□ -0.83
CDC42BPA-207ENST00000441725 RTN4Q9NQC3 1192 aaKnown RBP9.86□□□□□ -0.83
CDC42BPA-207ENST00000441725 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.85□□□□□ -0.83
CDC42BPA-207ENST00000441725 RNF39Q9H2S5 420 aa9.83□□□□□ -0.84
CDC42BPA-207ENST00000441725 AMER1Q5JTC6 1135 aaPredicted RBP9.78□□□□□ -0.84
CDC42BPA-207ENST00000441725 SLC4A2P04920 1241 aa9.78□□□□□ -0.84
CDC42BPA-207ENST00000441725 C1QBPQ07021 282 aaKnown RBP9.71□□□□□ -0.86
CDC42BPA-207ENST00000441725 U3KPZ7 1027 aaPredicted RBP9.69□□□□□ -0.86
CDC42BPA-207ENST00000441725 CACNB1Q02641 598 aaPredicted RBP9.66□□□□□ -0.86
CDC42BPA-207ENST00000441725 FKBP8Q14318 412 aa9.57□□□□□ -0.88
CDC42BPA-207ENST00000441725 MYCNP04198 464 aaPredicted RBP9.54□□□□□ -0.88
CDC42BPA-207ENST00000441725 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.53□□□□□ -0.88
CDC42BPA-207ENST00000441725 HNRNPUL2Q1KMD3 747 aaKnown RBP9.53□□□□□ -0.88
CDC42BPA-207ENST00000441725 ATXN8OSP0DMR3 200 aa9.5□□□□□ -0.89
CDC42BPA-207ENST00000441725 SAMD1Q6SPF0 538 aaPredicted RBP9.48□□□□□ -0.89
CDC42BPA-207ENST00000441725 APLP2Q06481 763 aa9.46□□□□□ -0.9
CDC42BPA-207ENST00000441725 SPINK5Q9NQ38 1064 aaPredicted RBP9.45□□□□□ -0.9
CDC42BPA-207ENST00000441725 CAPN15O75808 1086 aa9.41□□□□□ -0.9
CDC42BPA-207ENST00000441725 ZNF219Q9P2Y4 722 aaPredicted RBP9.34□□□□□ -0.91
CDC42BPA-207ENST00000441725 TRHP20396 242 aaPredicted RBP9.33□□□□□ -0.92
CDC42BPA-207ENST00000441725 DSG3P32926 999 aa9.3□□□□□ -0.92
CDC42BPA-207ENST00000441725 ATF5Q9Y2D1 282 aaPredicted RBP9.29□□□□□ -0.92
CDC42BPA-207ENST00000441725 ABCB7O75027 752 aa9.22□□□□□ -0.93
CDC42BPA-207ENST00000441725 POLA2Q14181 598 aa9.15□□□□□ -0.94
CDC42BPA-207ENST00000441725 PLCB2Q00722 1185 aa9.03□□□□□ -0.96
CDC42BPA-207ENST00000441725 ZBTB12Q9Y330 459 aaPredicted RBP9.02□□□□□ -0.97
CDC42BPA-207ENST00000441725 FBXO3Q9UK99 471 aa8.99□□□□□ -0.97
CDC42BPA-207ENST00000441725 SPDYE4A6NLX3 237 aa8.94□□□□□ -0.98
CDC42BPA-207ENST00000441725 HAP1P54257 671 aaPredicted RBP8.91□□□□□ -0.98
CDC42BPA-207ENST00000441725 FBLN2P98095 1184 aa8.9□□□□□ -0.98
CDC42BPA-207ENST00000441725 VASPP50552 380 aaPredicted RBP8.9□□□□□ -0.98
CDC42BPA-207ENST00000441725 MKRN4PQ13434 485 aaPredicted RBP8.89□□□□□ -0.99
CDC42BPA-207ENST00000441725 PROM2Q8N271 834 aa8.88□□□□□ -0.99
CDC42BPA-207ENST00000441725 RBM42Q9BTD8 480 aaKnown RBP8.87□□□□□ -0.99
CDC42BPA-207ENST00000441725 DCAF8L2P0C7V8 631 aa8.86□□□□□ -0.99
CDC42BPA-207ENST00000441725 IFNLR1Q8IU57 520 aaPredicted RBP8.86□□□□□ -0.99
CDC42BPA-207ENST00000441725 OSCARQ8IYS5 282 aa8.86□□□□□ -0.99
CDC42BPA-207ENST00000441725 PRKCSHP14314 528 aaPredicted RBP8.82□□□□□ -1
CDC42BPA-207ENST00000441725 BCANQ96GW7 911 aa8.81□□□□□ -1
CDC42BPA-207ENST00000441725 PKD2Q13563 968 aa8.8□□□□□ -1
CDC42BPA-207ENST00000441725 SPDYE2BA6NHP3 402 aa8.75□□□□□ -1.01
CDC42BPA-207ENST00000441725 SPDYE6P0CI01 402 aa8.75□□□□□ -1.01
CDC42BPA-207ENST00000441725 SPDYE2Q495Y8 402 aa8.75□□□□□ -1.01
CDC42BPA-207ENST00000441725 VSIG10Q8N0Z9 540 aa8.75□□□□□ -1.01
CDC42BPA-207ENST00000441725 TAOK2Q9UL54 1235 aa8.75□□□□□ -1.01
CDC42BPA-207ENST00000441725 AKT1S1Q96B36 256 aa8.73□□□□□ -1.01
CDC42BPA-207ENST00000441725 ZNF692Q9BU19 519 aaPredicted RBP8.68□□□□□ -1.02
CDC42BPA-207ENST00000441725 SSUH2Q9Y2M2 353 aa8.68□□□□□ -1.02
CDC42BPA-207ENST00000441725 KDM2AQ9Y2K7 1162 aa8.68□□□□□ -1.02
CDC42BPA-207ENST00000441725 REM2Q8IYK8 340 aaPredicted RBP8.64□□□□□ -1.03
CDC42BPA-207ENST00000441725 NPM1P06748 294 aaKnown RBP eCLIP8.63□□□□□ -1.03
CDC42BPA-207ENST00000441725 BBXQ8WY36 941 aaPredicted RBP8.63□□□□□ -1.03
CDC42BPA-207ENST00000441725 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.63□□□□□ -1.03
CDC42BPA-207ENST00000441725 TPRNQ4KMQ1 711 aa8.62□□□□□ -1.03
CDC42BPA-207ENST00000441725 PAXIP1Q6ZW49 1069 aaPredicted RBP8.61□□□□□ -1.03
CDC42BPA-207ENST00000441725 ECM2O94769 699 aaPredicted RBP8.61□□□□□ -1.03
CDC42BPA-207ENST00000441725 CFAP44Q96MT7 982 aa8.59□□□□□ -1.03
CDC42BPA-207ENST00000441725 KLHL34Q8N239 644 aa8.59□□□□□ -1.03
CDC42BPA-207ENST00000441725 SPOCK2Q92563 424 aa8.59□□□□□ -1.03
CDC42BPA-207ENST00000441725 PABPN1Q86U42 306 aaKnown RBP eCLIP8.57□□□□□ -1.04
CDC42BPA-207ENST00000441725 CHRDL2Q6WN34 429 aa8.56□□□□□ -1.04
CDC42BPA-207ENST00000441725 PITPNM1O00562 1244 aa8.55□□□□□ -1.04
CDC42BPA-207ENST00000441725 RGL2O15211 777 aa8.54□□□□□ -1.04
CDC42BPA-207ENST00000441725 SPDYE1Q8NFV5 336 aaPredicted RBP8.52□□□□□ -1.04
CDC42BPA-207ENST00000441725 TSHZ2Q9NRE2 1034 aa8.51□□□□□ -1.05
CDC42BPA-207ENST00000441725 SPRYD3Q8NCJ5 442 aa8.49□□□□□ -1.05
CDC42BPA-207ENST00000441725 CLEC11AQ9Y240 323 aa8.48□□□□□ -1.05
CDC42BPA-207ENST00000441725 PLCD3Q8N3E9 789 aa8.46□□□□□ -1.06
CDC42BPA-207ENST00000441725 POTEHQ6S545 545 aa8.45□□□□□ -1.06
CDC42BPA-207ENST00000441725 STAG3Q9UJ98 1225 aa8.45□□□□□ -1.06
CDC42BPA-207ENST00000441725 CHGAP10645 457 aaKnown RBP8.42□□□□□ -1.06
CDC42BPA-207ENST00000441725 FXR2P51116 673 aaKnown RBP eCLIP8.42□□□□□ -1.068e-7■■■■■ 31.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms