Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
EPHA3P29320 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
EPHA3P29320 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EPHA3P29320 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.16■□□□□ 0.34
EPHA3P29320 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.16■□□□□ 0.34
EPHA3P29320 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.16■□□□□ 0.34
EPHA3P29320 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
EPHA3P29320 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.16■□□□□ 0.34
EPHA3P29320 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.16■□□□□ 0.34
EPHA3P29320 MIR4785-201ENST00000585005 73 ntBASIC17.16■□□□□ 0.34
EPHA3P29320 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.16■□□□□ 0.34
EPHA3P29320 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
EPHA3P29320 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EPHA3P29320 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.16■□□□□ 0.34
EPHA3P29320 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EPHA3P29320 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
EPHA3P29320 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.16■□□□□ 0.34
EPHA3P29320 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.16■□□□□ 0.34
EPHA3P29320 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EPHA3P29320 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
EPHA3P29320 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EPHA3P29320 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EPHA3P29320 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EPHA3P29320 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
EPHA3P29320 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EPHA3P29320 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
EPHA3P29320 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
EPHA3P29320 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.15■□□□□ 0.34
EPHA3P29320 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
EPHA3P29320 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
EPHA3P29320 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
EPHA3P29320 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
EPHA3P29320 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.15■□□□□ 0.34
EPHA3P29320 KRT18P65-201ENST00000439811 1286 ntBASIC17.15■□□□□ 0.34
EPHA3P29320 EGLN1P1-201ENST00000531623 762 ntBASIC17.15■□□□□ 0.34
EPHA3P29320 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.15■□□□□ 0.34
EPHA3P29320 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.15■□□□□ 0.34
EPHA3P29320 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.15■□□□□ 0.34
EPHA3P29320 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.15■□□□□ 0.34
EPHA3P29320 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.15■□□□□ 0.34
EPHA3P29320 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
EPHA3P29320 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.15■□□□□ 0.34
EPHA3P29320 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.15■□□□□ 0.34
EPHA3P29320 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
EPHA3P29320 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
EPHA3P29320 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
EPHA3P29320 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
EPHA3P29320 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
EPHA3P29320 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.15■□□□□ 0.34
EPHA3P29320 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
EPHA3P29320 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.14■□□□□ 0.34
EPHA3P29320 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
EPHA3P29320 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
EPHA3P29320 AC016396.2-201ENST00000562575 1417 ntBASIC17.14■□□□□ 0.33
EPHA3P29320 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.14■□□□□ 0.33
EPHA3P29320 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA3P29320 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA3P29320 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA3P29320 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA3P29320 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA3P29320 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA3P29320 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA3P29320 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
EPHA3P29320 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.14■□□□□ 0.33
EPHA3P29320 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.14■□□□□ 0.33
EPHA3P29320 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.14■□□□□ 0.33
EPHA3P29320 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA3P29320 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA3P29320 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
EPHA3P29320 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.14■□□□□ 0.33
EPHA3P29320 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA3P29320 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA3P29320 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA3P29320 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
EPHA3P29320 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
EPHA3P29320 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms