Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC21■□□□□ 0.95
NCLP19338 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21■□□□□ 0.95
NCLP19338 AC093010.1-201ENST00000473625 1624 ntBASIC21■□□□□ 0.95
NCLP19338 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21■□□□□ 0.95
NCLP19338 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21■□□□□ 0.95
NCLP19338 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC21■□□□□ 0.95
NCLP19338 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NCLP19338 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
NCLP19338 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
NCLP19338 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCLP19338 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCLP19338 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCLP19338 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NCLP19338 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCLP19338 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
NCLP19338 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.99■□□□□ 0.95
NCLP19338 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCLP19338 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NCLP19338 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.99■□□□□ 0.95
NCLP19338 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.99■□□□□ 0.95
NCLP19338 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.99■□□□□ 0.95
NCLP19338 KRT18P57-201ENST00000443599 1254 ntBASIC20.99■□□□□ 0.95
NCLP19338 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.99■□□□□ 0.95
NCLP19338 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NCLP19338 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NCLP19338 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCLP19338 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NCLP19338 LINC01126-201ENST00000623515 1646 ntBASIC20.99■□□□□ 0.95
NCLP19338 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCLP19338 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCLP19338 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC20.99■□□□□ 0.95
NCLP19338 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCLP19338 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NCLP19338 AL355312.1-201ENST00000407115 2176 ntBASIC20.99■□□□□ 0.95
NCLP19338 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NCLP19338 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NCLP19338 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NCLP19338 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NCLP19338 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
NCLP19338 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NCLP19338 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
NCLP19338 INGX-201ENST00000359239 846 ntBASIC20.98■□□□□ 0.95
NCLP19338 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.98■□□□□ 0.95
NCLP19338 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.98■□□□□ 0.95
NCLP19338 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.98■□□□□ 0.95
NCLP19338 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
NCLP19338 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NCLP19338 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NCLP19338 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
NCLP19338 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.98■□□□□ 0.95
NCLP19338 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NCLP19338 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NCLP19338 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.98■□□□□ 0.95
NCLP19338 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NCLP19338 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.97■□□□□ 0.95
NCLP19338 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NCLP19338 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCLP19338 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCLP19338 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCLP19338 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCLP19338 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NCLP19338 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCLP19338 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCLP19338 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCLP19338 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCLP19338 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
NCLP19338 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCLP19338 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.97■□□□□ 0.95
NCLP19338 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.97■□□□□ 0.95
NCLP19338 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.97■□□□□ 0.95
NCLP19338 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCLP19338 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NCLP19338 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NCLP19338 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.97■□□□□ 0.95
NCLP19338 AC010203.1-204ENST00000548782 407 ntBASIC20.97■□□□□ 0.95
NCLP19338 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
NCLP19338 FAM87A-204ENST00000613235 858 ntBASIC20.97■□□□□ 0.95
NCLP19338 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
NCLP19338 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCLP19338 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
NCLP19338 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCLP19338 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC20.97■□□□□ 0.95
NCLP19338 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NCLP19338 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCLP19338 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NCLP19338 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC20.97■□□□□ 0.95
NCLP19338 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.97■□□□□ 0.95
NCLP19338 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.97■□□□□ 0.95
NCLP19338 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLP19338 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.96■□□□□ 0.95
NCLP19338 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLP19338 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC20.96■□□□□ 0.95
NCLP19338 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLP19338 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLP19338 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLP19338 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLP19338 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NCLP19338 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLP19338 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NCLP19338 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms