Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 ECEL1P2-202ENST00000465689 757 ntBASIC15.5■□□□□ 0.07
ATF1P18846 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.5■□□□□ 0.07
ATF1P18846 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.5■□□□□ 0.07
ATF1P18846 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.5■□□□□ 0.07
ATF1P18846 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATF1P18846 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
ATF1P18846 FAM87A-204ENST00000613235 858 ntBASIC15.5■□□□□ 0.07
ATF1P18846 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATF1P18846 LINC01451-201ENST00000623792 534 ntBASIC15.5■□□□□ 0.07
ATF1P18846 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATF1P18846 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATF1P18846 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATF1P18846 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
ATF1P18846 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATF1P18846 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATF1P18846 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATF1P18846 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATF1P18846 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATF1P18846 DOC2GP-204ENST00000639052 2548 ntBASIC15.5■□□□□ 0.07
ATF1P18846 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ATF1P18846 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.5■□□□□ 0.07
ATF1P18846 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATF1P18846 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ATF1P18846 FLJ38576-201ENST00000623820 2459 ntBASIC15.5■□□□□ 0.07
ATF1P18846 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.5■□□□□ 0.07
ATF1P18846 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
ATF1P18846 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATF1P18846 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
ATF1P18846 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATF1P18846 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATF1P18846 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.49■□□□□ 0.07
ATF1P18846 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
ATF1P18846 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.49■□□□□ 0.07
ATF1P18846 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATF1P18846 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.49■□□□□ 0.07
ATF1P18846 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATF1P18846 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATF1P18846 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
ATF1P18846 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.49■□□□□ 0.07
ATF1P18846 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATF1P18846 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATF1P18846 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
ATF1P18846 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
ATF1P18846 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.49■□□□□ 0.07
ATF1P18846 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.49■□□□□ 0.07
ATF1P18846 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATF1P18846 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.49■□□□□ 0.07
ATF1P18846 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.49■□□□□ 0.07
ATF1P18846 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATF1P18846 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATF1P18846 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATF1P18846 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATF1P18846 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATF1P18846 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.49■□□□□ 0.07
ATF1P18846 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATF1P18846 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
ATF1P18846 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATF1P18846 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATF1P18846 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ATF1P18846 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.49■□□□□ 0.07
ATF1P18846 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ATF1P18846 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.49■□□□□ 0.07
ATF1P18846 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATF1P18846 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
ATF1P18846 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATF1P18846 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.48■□□□□ 0.07
ATF1P18846 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.48■□□□□ 0.07
ATF1P18846 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ATF1P18846 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.48■□□□□ 0.07
ATF1P18846 PVRIG2P-201ENST00000435460 978 ntBASIC15.48■□□□□ 0.07
ATF1P18846 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.48■□□□□ 0.07
ATF1P18846 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.48■□□□□ 0.07
ATF1P18846 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC15.48■□□□□ 0.07
ATF1P18846 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.48■□□□□ 0.07
ATF1P18846 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.48■□□□□ 0.07
ATF1P18846 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
ATF1P18846 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.48■□□□□ 0.07
ATF1P18846 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.48■□□□□ 0.07
ATF1P18846 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
ATF1P18846 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATF1P18846 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ATF1P18846 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.48■□□□□ 0.07
ATF1P18846 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATF1P18846 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
ATF1P18846 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
ATF1P18846 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
ATF1P18846 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATF1P18846 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.48■□□□□ 0.07
ATF1P18846 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.48■□□□□ 0.07
ATF1P18846 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ATF1P18846 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
ATF1P18846 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.47■□□□□ 0.07
ATF1P18846 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATF1P18846 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
ATF1P18846 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATF1P18846 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
ATF1P18846 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
ATF1P18846 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
ATF1P18846 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
ATF1P18846 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms