Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 AC104640.1-201ENST00000562617 2109 ntBASIC10.91□□□□□ -0.66
PDE6GP18545 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC10.91□□□□□ -0.66
PDE6GP18545 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PDE6GP18545 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
PDE6GP18545 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
PDE6GP18545 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PDE6GP18545 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
PDE6GP18545 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
PDE6GP18545 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
PDE6GP18545 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
PDE6GP18545 AC060834.1-201ENST00000443027 2032 ntBASIC10.91□□□□□ -0.66
PDE6GP18545 UROS-202ENST00000368778 1556 ntTSL 2 BASIC10.9□□□□□ -0.66
PDE6GP18545 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC10.9□□□□□ -0.66
PDE6GP18545 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
PDE6GP18545 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC10.9□□□□□ -0.66
PDE6GP18545 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC10.9□□□□□ -0.66
PDE6GP18545 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
PDE6GP18545 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC10.9□□□□□ -0.66
PDE6GP18545 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
PDE6GP18545 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC10.9□□□□□ -0.66
PDE6GP18545 AF213884.3-201ENST00000563833 479 ntBASIC10.9□□□□□ -0.66
PDE6GP18545 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC10.9□□□□□ -0.66
PDE6GP18545 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
PDE6GP18545 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
PDE6GP18545 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC10.9□□□□□ -0.66
PDE6GP18545 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC10.9□□□□□ -0.66
PDE6GP18545 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC10.9□□□□□ -0.66
PDE6GP18545 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.66
PDE6GP18545 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.66
PDE6GP18545 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.66
PDE6GP18545 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC10.9□□□□□ -0.66
PDE6GP18545 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC10.9□□□□□ -0.66
PDE6GP18545 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC10.9□□□□□ -0.66
PDE6GP18545 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
PDE6GP18545 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
PDE6GP18545 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC10.9□□□□□ -0.67
PDE6GP18545 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC10.9□□□□□ -0.67
PDE6GP18545 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC10.9□□□□□ -0.67
PDE6GP18545 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
PDE6GP18545 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
PDE6GP18545 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
PDE6GP18545 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC10.9□□□□□ -0.67
PDE6GP18545 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
PDE6GP18545 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
PDE6GP18545 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
PDE6GP18545 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
PDE6GP18545 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC10.9□□□□□ -0.67
PDE6GP18545 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC10.9□□□□□ -0.67
PDE6GP18545 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
PDE6GP18545 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
PDE6GP18545 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PDE6GP18545 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC10.89□□□□□ -0.67
PDE6GP18545 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
PDE6GP18545 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PDE6GP18545 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PDE6GP18545 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC10.89□□□□□ -0.67
PDE6GP18545 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC10.89□□□□□ -0.67
PDE6GP18545 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
PDE6GP18545 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PDE6GP18545 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
PDE6GP18545 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC10.89□□□□□ -0.67
PDE6GP18545 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC10.89□□□□□ -0.67
PDE6GP18545 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PDE6GP18545 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PDE6GP18545 AC009102.3-201ENST00000623118 1491 ntBASIC10.89□□□□□ -0.67
PDE6GP18545 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PDE6GP18545 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC10.89□□□□□ -0.67
PDE6GP18545 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
PDE6GP18545 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
PDE6GP18545 HYMAI-201ENST00000635591 3347 ntBASIC10.89□□□□□ -0.67
PDE6GP18545 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
PDE6GP18545 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms