Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTPS1P17812 LETM1P2-201ENST00000597330 2178 ntBASIC17.72■□□□□ 0.43
CTPS1P17812 GNAS-203ENST00000306120 1878 ntBASIC17.71■□□□□ 0.43
CTPS1P17812 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
CTPS1P17812 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTPS1P17812 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
CTPS1P17812 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.71■□□□□ 0.43
CTPS1P17812 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTPS1P17812 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.71■□□□□ 0.43
CTPS1P17812 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTPS1P17812 AC026471.1-201ENST00000564629 3026 ntBASIC17.71■□□□□ 0.43
CTPS1P17812 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTPS1P17812 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CTPS1P17812 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTPS1P17812 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.71■□□□□ 0.43
CTPS1P17812 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.71■□□□□ 0.43
CTPS1P17812 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.71■□□□□ 0.43
CTPS1P17812 AC111152.3-201ENST00000569699 673 ntBASIC17.71■□□□□ 0.43
CTPS1P17812 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.71■□□□□ 0.43
CTPS1P17812 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTPS1P17812 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.71■□□□□ 0.43
CTPS1P17812 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTPS1P17812 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTPS1P17812 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.71■□□□□ 0.43
CTPS1P17812 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTPS1P17812 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.71■□□□□ 0.43
CTPS1P17812 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.71■□□□□ 0.43
CTPS1P17812 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.71■□□□□ 0.43
CTPS1P17812 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTPS1P17812 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
CTPS1P17812 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.71■□□□□ 0.43
CTPS1P17812 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTPS1P17812 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTPS1P17812 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.7■□□□□ 0.42
CTPS1P17812 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS1P17812 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS1P17812 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CTPS1P17812 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS1P17812 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS1P17812 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS1P17812 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS1P17812 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CTPS1P17812 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS1P17812 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CTPS1P17812 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS1P17812 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.7■□□□□ 0.42
CTPS1P17812 AKR1C7P-201ENST00000305623 895 ntBASIC17.7■□□□□ 0.42
CTPS1P17812 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS1P17812 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS1P17812 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS1P17812 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.7■□□□□ 0.42
CTPS1P17812 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.7■□□□□ 0.42
CTPS1P17812 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.7■□□□□ 0.42
CTPS1P17812 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.7■□□□□ 0.42
CTPS1P17812 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.7■□□□□ 0.42
CTPS1P17812 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.7■□□□□ 0.42
CTPS1P17812 EMBP1-201ENST00000458200 901 ntBASIC17.7■□□□□ 0.42
CTPS1P17812 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS1P17812 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS1P17812 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS1P17812 AP001269.4-201ENST00000609611 512 ntBASIC17.7■□□□□ 0.42
CTPS1P17812 AC019129.2-201ENST00000609837 1235 ntBASIC17.7■□□□□ 0.42
CTPS1P17812 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS1P17812 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CTPS1P17812 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.7■□□□□ 0.42
CTPS1P17812 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS1P17812 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CTPS1P17812 KRT8P10-201ENST00000450021 1447 ntBASIC17.7■□□□□ 0.42
CTPS1P17812 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.7■□□□□ 0.42
CTPS1P17812 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.7■□□□□ 0.42
CTPS1P17812 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CTPS1P17812 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.7■□□□□ 0.42
CTPS1P17812 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS1P17812 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CTPS1P17812 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS1P17812 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.7■□□□□ 0.42
CTPS1P17812 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTPS1P17812 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CTPS1P17812 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS1P17812 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS1P17812 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS1P17812 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.69■□□□□ 0.42
CTPS1P17812 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
CTPS1P17812 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.69■□□□□ 0.42
CTPS1P17812 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CTPS1P17812 PKD1P1-201ENST00000458669 6805 ntBASIC17.69■□□□□ 0.42
CTPS1P17812 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
CTPS1P17812 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.69■□□□□ 0.42
CTPS1P17812 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS1P17812 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS1P17812 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS1P17812 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS1P17812 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS1P17812 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.69■□□□□ 0.42
CTPS1P17812 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.69■□□□□ 0.42
CTPS1P17812 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTPS1P17812 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.69■□□□□ 0.42
CTPS1P17812 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.69■□□□□ 0.42
CTPS1P17812 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.69■□□□□ 0.42
CTPS1P17812 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms